RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 RNF139Q8WU17 664 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 MCRS1Q96EZ8 462 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 EIF3CQ99613 913 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 POPDC2Q9HBU9 364 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 PRDM6Q9NQX0 595 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 METTL5Q9NRN9 209 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 CLIC5Q9NZA1 410 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 MYO1AQ9UBC5 1043 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 CNOT8Q9UFF9 292 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 NUP210Q8TEM1 1887 aaPredicted RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 ANKRD62A6NC57 917 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 ARHGAP6O43182 974 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 TLR5O60602 858 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 MOSPD3O75425 235 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 GRAP2O75791 330 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 RRM1P23921 792 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 GBP2P32456 591 aaPredicted RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 TUBP50607 506 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 RNASE9P60153 205 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 MTF1Q14872 753 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 AAK1Q2M2I8 961 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 TXNDC8Q6A555 127 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 PTCRAQ6ISU1 281 aaPredicted RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 RAD9BQ6WBX8 426 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 HFE2Q6ZVN8 426 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 SLC26A9Q7LBE3 791 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 MAB21L3Q8N8X9 362 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 CTNNBL1Q8WYA6 563 aaPredicted RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 PIWIL1Q96J94 861 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 TASP1Q9H6P5 420 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 NENFQ9UMX5 172 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 SCINQ9Y6U3 715 aa22.6■■□□□ 1.21
TSPAN9-208ENST00000640568 HELZP42694 1942 aaKnown RBP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 TRAV19A0A0A6YYK7 116 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 C2orf78A6NCI8 922 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 ATMINO43313 823 aaPredicted RBP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 NCAM1P13591 858 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 MAGEA1P43355 309 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 GALCP54803 685 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 YWHAZP63104 245 aaKnown RBP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 TFF2Q03403 129 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 STXBP5Q5T5C0 1151 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 EDEM1Q92611 657 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 PPP1R9BQ96SB3 815 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 THAP2Q9H0W7 228 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 CCSER2Q9H7U1 834 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 OLA1Q9NTK5 396 aaKnown RBP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 PARVAQ9NVD7 372 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 OSER1Q9NX31 292 aa22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.59■■□□□ 1.21
TSPAN9-208ENST00000640568 DOCK8Q8NF50 2099 aa22.58■■□□□ 1.21
TSPAN9-208ENST00000640568 LCA5LO95447 670 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 CKMP06732 381 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 KRT3P12035 628 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 PFKLP17858 780 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 PGFP49763 221 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 GPC5P78333 572 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 TAF5Q15542 800 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 C10orf120Q5SQS8 335 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 DCUN1D2Q6PH85 259 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 NPAS3Q8IXF0 933 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 FGF13Q92913 245 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 ACSF2Q96CM8 615 aaPredicted RBP22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 MRPL47Q9HD33 250 aaKnown RBP22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 PRUNE2Q8WUY3 3088 aa22.58■■□□□ 1.2
TSPAN9-208ENST00000640568 SOBPA7XYQ1 873 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 DAB1O75553 588 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 HDCP19113 662 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 ATP5C1P36542 298 aaKnown RBP22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 AVPR1AP37288 418 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 KRT83P78385 493 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 OTOP3Q7RTS5 596 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 GDE1Q9NZC3 331 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 NUDT5Q9UKK9 219 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 CDH7Q9ULB5 785 aa22.57■■□□□ 1.2
TSPAN9-208ENST00000640568 NRG2O14511 850 aaPredicted RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 ZNF263O14978 683 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 OAS1P00973 400 aaKnown RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 TMEM253P0C7T8 217 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 MBL2P11226 248 aaPredicted RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 CCZ1BP86790 482 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 CCZ1P86791 482 aaPredicted RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 SMAD2Q15796 467 aaKnown RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 DCAF6Q58WW2 860 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 BEND5Q7L4P6 421 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 DEFB106AQ8N104 65 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 TXLNBQ8N3L3 684 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 ARL14EPQ8N8R7 260 aaPredicted RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 SLC46A2Q9BY10 475 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 PACSIN1Q9BY11 444 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 RASAL2Q9UJF2 1139 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 INTUQ9ULD6 942 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 NAALADL1Q9UQQ1 740 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 PCDHA13Q9Y5I0 950 aa22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 ZFP37Q9Y6Q3 630 aaPredicted RBP22.56■■□□□ 1.2
TSPAN9-208ENST00000640568 SIGLEC16A6NMB1 481 aa22.55■■□□□ 1.2
TSPAN9-208ENST00000640568 COCHO43405 550 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms