RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TJP2Q9UDY2 1190 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 PIAS3Q9Y6X2 628 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 CAVIN2O95810 425 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 CYP11B1P15538 503 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 AOC1P19801 751 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 ATP5C1P36542 298 aaKnown RBP28.02■■■□□ 2.08
VEGFA-231ENST00000640499 MLLT6P55198 1093 aaPredicted RBP28.02■■■□□ 2.08
VEGFA-231ENST00000640499 FZD5Q13467 585 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 RUNX3Q13761 415 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 EML3Q32P44 896 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 TXNDC11Q6PKC3 985 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 SIX6OS1Q8N1H7 587 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 CSGALNACT1Q8TDX6 532 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 LHX5Q9H2C1 402 aa28.02■■■□□ 2.08
VEGFA-231ENST00000640499 KANSL1LA0AUZ9 987 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 NR1I3Q14994 352 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 PDGFRLQ15198 375 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 BSPRYQ5W0U4 402 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 CC2D1AQ6P1N0 951 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-231ENST00000640499 TMEM110Q86TL2 294 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 NOP9Q86U38 636 aaKnown RBP28.01■■■□□ 2.07
VEGFA-231ENST00000640499 PASD1Q8IV76 773 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 SCUBE3Q8IX30 993 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 SHDQ96IW2 340 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 RAPGEFL1Q9UHV5 662 aa28.01■■■□□ 2.07
VEGFA-231ENST00000640499 GLULP15104 373 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 ITPRIPL2Q3MIP1 535 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 C10orf120Q5SQS8 335 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 SUGP1Q8IWZ8 645 aaKnown RBP28■■■□□ 2.07
VEGFA-231ENST00000640499 ARHGAP18Q8N392 663 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 KIAA1958Q8N8K9 716 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 MIS12Q9H081 205 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 LTB4R2Q9NPC1 389 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 DLGAP2Q9P1A6 1054 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 DNMT3LQ9UJW3 386 aa28■■■□□ 2.07
VEGFA-231ENST00000640499 E5RJQ4 531 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 SPECC1L-ADORA2AF8WAN1 911 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 STK25O00506 426 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 PAPSS1O43252 624 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-231ENST00000640499 GFPT2O94808 682 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 FYNP06241 537 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 RALAP11233 206 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 TARSP26639 723 aaKnown RBP27.99■■■□□ 2.07
VEGFA-231ENST00000640499 CTHP32929 405 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 SOX5P35711 763 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 BPIFB4P59827 614 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 PDCLQ13371 301 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 ADGRG2Q8IZP9 1017 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 PJA1Q8NG27 643 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 NEK11Q8NG66 645 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 EPS8L1Q8TE68 723 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 IRGQQ8WZA9 623 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 EDEM1Q92611 657 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 PCMTD1Q96MG8 357 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-231ENST00000640499 CPXM1Q96SM3 734 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 NACA2Q9H009 215 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 ECT2Q9H8V3 914 aa27.99■■■□□ 2.07
VEGFA-231ENST00000640499 NOCTQ9UK39 431 aaKnown RBP27.99■■■□□ 2.07
VEGFA-231ENST00000640499 E2F8A0AVK6 867 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 KPNA1P52294 538 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-231ENST00000640499 FANCCQ00597 558 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 GAB4Q2WGN9 574 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 NAIF1Q69YI7 327 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-231ENST00000640499 LRSAM1Q6UWE0 723 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 ZNF852Q6ZMS4 543 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 DDX42Q86XP3 938 aaKnown RBP eCLIP27.98■■■□□ 2.074e-7■■■□□ 19
VEGFA-231ENST00000640499 CCDC105Q8IYK2 499 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 C1orf131Q8NDD1 294 aaKnown RBP27.98■■■□□ 2.07
VEGFA-231ENST00000640499 FAM3CQ92520 227 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 ST7Q9NRC1 585 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 DAAM1Q9Y4D1 1078 aa27.98■■■□□ 2.07
VEGFA-231ENST00000640499 FAM170BA6NMN3 283 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 DCNP07585 359 aaKnown RBP27.97■■■□□ 2.07
VEGFA-231ENST00000640499 IRF1P10914 325 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 CHRNB2P17787 502 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 KRT9P35527 623 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 IFNAR2P48551 515 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 EFEMP1Q12805 493 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 TAF3Q5VWG9 929 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 BTBD8Q5XKL5 378 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 RALGPS2Q86X27 583 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-231ENST00000640499 MIB1Q86YT6 1006 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 BBS7Q8IWZ6 715 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 SLC20A1Q8WUM9 679 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 C8orf33Q9H7E9 229 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-231ENST00000640499 SIT1Q9Y3P8 196 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 WDFY4Q6ZS81 3184 aa27.97■■■□□ 2.07
VEGFA-231ENST00000640499 MYOFQ9NZM1 2061 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 FBXO21O94952 628 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 KLKB1P03952 638 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 CDH5P33151 784 aaPredicted RBP27.96■■■□□ 2.07
VEGFA-231ENST00000640499 ACADSBP45954 432 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 UBXN2BQ14CS0 331 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 HTR3DQ70Z44 454 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 BAP1Q92560 729 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 PIWIL1Q96J94 861 aaKnown RBP27.96■■■□□ 2.07
VEGFA-231ENST00000640499 RASAL2Q9UJF2 1139 aa27.96■■■□□ 2.07
VEGFA-231ENST00000640499 A0A1W2PQC6 194 aa27.95■■■□□ 2.06
VEGFA-231ENST00000640499 MAN2B1O00754 1011 aa27.95■■■□□ 2.06
VEGFA-231ENST00000640499 STC2O76061 302 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms