RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	MYO1D	O94832	1006 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	CYP2C9	P11712	490 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	GSS	P48637	474 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	COPZ1	P61923	177 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	FAM102B	Q5T8I3	360 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	KRT39	Q6A163	491 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	KCNK18	Q7Z418	384 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZNF713	Q8N859	430 aa	Predicted RBP	11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	XXYLT1	Q8NBI6	393 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	PSMA8	Q8TAA3	256 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	RIOK1	Q9BRS2	568 aa	Known RBP	11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	KCNMB3	Q9NPA1	279 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	IGSF9B	Q9UPX0	1349 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895		H3BNX3	289 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	ITM2A	O43736	263 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	TSC22D2	O75157	780 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	UFL1	O94874	794 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	FASTKD1	Q53R41	847 aa	Known RBP	11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	TMC7	Q7Z402	723 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	CDH24	Q86UP0	819 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	TTC30A	Q86WT1	665 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC35C1	Q96A29	364 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	THAP1	Q9NVV9	213 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	GPRC5D	Q9NZD1	345 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	DNAJB4	Q9UDY4	337 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	LGALS13	Q9UHV8	139 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	POMP	Q9Y244	141 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	TMEM98	Q9Y2Y6	226 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	SQOR	Q9Y6N5	450 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZNF804B	A4D1E1	1349 aa		11.72	□□□□□ -0.53
SPIN3-231	ENST00000639895	POLR2B	P30876	1174 aa	Known RBP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	LSM3	P62310	102 aa	Known RBP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	SMU1	Q2TAY7	513 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	BNIPL	Q7Z465	357 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	LRP10	Q7Z4F1	713 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC26A11	Q86WA9	606 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	FAM71D	Q8N9W8	422 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	REXO4	Q9GZR2	422 aa	Known RBP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	PLEKHA5	Q9HAU0	1116 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	USP29	Q9HBJ7	922 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	TRPV5	Q9NQA5	729 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	VPS45	Q9NRW7	570 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	DGKB	Q9Y6T7	804 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	SNX2	O60749	519 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	SERPINA6	P08185	405 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	KRT7	P08729	469 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	NLRP11	P59045	1033 aa	Known RBP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	FASTKD3	Q14CZ7	662 aa	Known RBP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	EPHA7	Q15375	998 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	FAXC	Q5TGI0	409 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	SCARA3	Q6AZY7	606 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	IQCF2	Q8IXL9	164 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	RCOR2	Q8IZ40	523 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	AHI1	Q8N157	1196 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	PNMA5	Q96PV4	448 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	ACCS	Q96QU6	501 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	MAN1C1	Q9NR34	630 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	DNPEP	Q9ULA0	475 aa		11.71	□□□□□ -0.53
SPIN3-231	ENST00000639895	CST8	O60676	142 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	P4HA1	P13674	534 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	POLR2E	P19388	210 aa	Known RBP	11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	CTC1	Q2NKJ3	1217 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	C11orf74	Q86VG3	221 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZNF34	Q8IZ26	560 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	PIWIL2	Q8TC59	973 aa	Known RBP	11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	OSCP1	Q8WVF1	389 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	LRRC37A3	O60309	1634 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	TRAFD1	O14545	582 aa	Predicted RBP	11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	USP12	O75317	370 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	OSBP	P22059	807 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	KRT6C	P48668	564 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	UBXN2A	P68543	259 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	MOGS	Q13724	837 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	ARSH	Q5FYA8	562 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	SPDYA	Q5MJ70	313 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	TMEM270	Q6UE05	265 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	DNAAF3	Q8N9W5	541 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	ADCY4	Q8NFM4	1077 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	BPIFB6	Q8NFQ5	453 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895	ACP6	Q9NPH0	428 aa		11.71	□□□□□ -0.54
SPIN3-231	ENST00000639895		A0A1W2PPW3	197 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	HNRNPDL	O14979	420 aa	Known RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	CYP1A1	P04798	512 aa	Predicted RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	ABHD2	P08910	425 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	RBP3	P10745	1247 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	IDO1	P14902	403 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	ELK3	P41970	407 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	GPSM2	P81274	684 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	KCTD1	Q719H9	257 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	CIB1	Q99828	191 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	RPRD1B	Q9NQG5	326 aa	Known RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	IP6K2	Q9UHH9	426 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	MID2	Q9UJV3	735 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	CENPX	A8MT69	81 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	USP17L5	A8MUK1	530 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	SMIM22	K7EJ46	135 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms