RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ATG16L1Q676U5 607 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 SFRP4Q6FHJ7 346 aaPredicted RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 FOXR2Q6PJQ5 311 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 TMEM108Q6UXF1 575 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 NEK10Q6ZWH5 1172 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 C1orf210Q8IVY1 113 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 ZNF808Q8N4W9 903 aaPredicted RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 AMER2Q8N7J2 671 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 NSUN7Q8NE18 718 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 OR52N2Q8NGI0 321 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 MBD3L2Q8NHZ7 208 aaPredicted RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 CACTINQ8WUQ7 758 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 ZUFSPQ96AP4 578 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 TIGD1Q96MW7 591 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 OR14A2Q96R54 314 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 BARD1Q99728 777 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 TREX2Q9BQ50 279 aaPredicted RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 NUDT16L1Q9BRJ7 211 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 PLA2G12BQ9BX93 195 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 TBX20Q9UMR3 447 aa7.18□□□□□ -1.26
RFC1-217ENST00000639695 MRPS17Q9Y2R5 130 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 SETD1BQ9UPS6 1966 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 WDR33Q9C0J8 1336 aaKnown RBP7.18□□□□□ -1.26
RFC1-217ENST00000639695 E7ENX8 843 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 CD3EAPO15446 510 aaKnown RBP7.17□□□□□ -1.26
RFC1-217ENST00000639695 GFPT2O94808 682 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 RTN3O95197 1032 aaPredicted RBP7.17□□□□□ -1.26
RFC1-217ENST00000639695 CNPP09543 421 aaKnown RBP7.17□□□□□ -1.26
RFC1-217ENST00000639695 GATMP50440 423 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 CDK7P50613 346 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 PGDP52209 483 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 ZNF134P52741 427 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 TAP2Q03519 686 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 GRM7Q14831 915 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 SMAD1Q15797 465 aaKnown RBP7.17□□□□□ -1.26
RFC1-217ENST00000639695 PTCHD3Q3KNS1 767 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 ZNF569Q5MCW4 686 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 CERCAMQ5T4B2 595 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 TSHZ3Q63HK5 1081 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 ACAD10Q6JQN1 1059 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 POLNQ7Z5Q5 900 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.17□□□□□ -1.26
RFC1-217ENST00000639695 SLC15A3Q8IY34 581 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 HMGB4Q8WW32 186 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 TMEM176AQ96HP8 235 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 REEP2Q9BRK0 252 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 CHCHD6Q9BRQ6 235 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 GBA2Q9HCG7 927 aaPredicted RBP7.17□□□□□ -1.26
RFC1-217ENST00000639695 BAG5Q9UL15 447 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 CNTN6Q9UQ52 1028 aa7.17□□□□□ -1.26
RFC1-217ENST00000639695 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.17□□□□□ -1.26
RFC1-217ENST00000639695 A0A1W2PPH5 198 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 FAM90A9PA6NNJ1 464 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 LARGE1O95461 756 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 PPIFP30405 207 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 ATXN1P54253 815 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 KRT32Q14532 448 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 ELAVL1Q15717 326 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 GPATCH4Q5T3I0 446 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 NAA35Q5VZE5 725 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 HAUS3Q68CZ6 603 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 SYT13Q7L8C5 426 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 ZNF575Q86XF7 245 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 ELOA2Q8IYF1 753 aaPredicted RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 TDRD7Q8NHU6 1098 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 RNPEPQ9H4A4 650 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 CXorf36Q9H7Y0 433 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 TMLHEQ9NVH6 421 aa7.16□□□□□ -1.26
RFC1-217ENST00000639695 ORC3Q9UBD5 711 aaPredicted RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 NDRG4Q9ULP0 352 aaKnown RBP7.16□□□□□ -1.26
RFC1-217ENST00000639695 FSD2A1L4K1 749 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 TOR1BO14657 336 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 SEPT4O43236 478 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 TAF5LO75529 589 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 HNRNPA1P09651 372 aaKnown RBP eCLIP7.15□□□□□ -1.26
RFC1-217ENST00000639695 HGFP14210 728 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 RPS6KB1P23443 525 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 EPHA3P29320 983 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 MCM7P33993 719 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 DCAF7P61962 342 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 CSRP2Q16527 193 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 P3H1Q32P28 736 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 TBRG1Q3YBR2 411 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 ARHGAP40Q5TG30 622 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.15□□□□□ -1.26
RFC1-217ENST00000639695 RHOT2Q8IXI1 618 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 GSPT2Q8IYD1 628 aaKnown RBP7.15□□□□□ -1.26
RFC1-217ENST00000639695 FSTL5Q8N475 847 aaPredicted RBP7.15□□□□□ -1.26
RFC1-217ENST00000639695 MDGA1Q8NFP4 955 aa7.15□□□□□ -1.26
RFC1-217ENST00000639695 ADAMTS15Q8TE58 950 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms