RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 MICU3Q86XE3 530 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 FAM177A1Q8N128 213 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-211ENST00000638889 OR56A3Q8NH54 315 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 IL31RAQ8NI17 732 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 BCAS4Q8TDM0 211 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 MAML1Q92585 1016 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 NT5C1BQ96P26 610 aa4.25□□□□□ -1.73
CCDC7-211ENST00000638889 E2F8A0AVK6 867 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 FOXN3O00409 490 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-211ENST00000638889 RRP9O43818 475 aaKnown RBP4.24□□□□□ -1.73
CCDC7-211ENST00000638889 USP12O75317 370 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 KLRC1P26715 233 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 MCM5P33992 734 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 CPA2P48052 419 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 PGDP52209 483 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 YPEL5P62699 121 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 EARS2Q5JPH6 523 aaKnown RBP4.24□□□□□ -1.73
CCDC7-211ENST00000638889 KRT78Q8N1N4 520 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 PELI3Q8N2H9 469 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 SLC35G2Q8TBE7 412 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 WIPF2Q8TF74 440 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-211ENST00000638889 ZNF668Q96K58 619 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-211ENST00000638889 ZBTB45Q96K62 511 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-211ENST00000638889 VPS33BQ9H267 617 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 ATP6V0A4Q9HBG4 840 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 ZBTB40Q9NUA8 1239 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 FZD4Q9ULV1 537 aa4.24□□□□□ -1.73
CCDC7-211ENST00000638889 SPATA31A1Q5TZJ5 1347 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 TRIM43BA6NCK2 446 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 PRSS44E7EML9 344 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 PYCARD-AS1I3L0S3 204 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 INPPL1O15357 1258 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 ADRA1DP25100 572 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 SLC7A1P30825 629 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 CDKN2AP42771 156 aaKnown RBP4.23□□□□□ -1.73
CCDC7-211ENST00000638889 PTDSS1P48651 473 aaKnown RBP4.23□□□□□ -1.73
CCDC7-211ENST00000638889 ZNF549Q6P9A3 640 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 MAEAQ7L5Y9 396 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 KCTD20Q7Z5Y7 419 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 TRIM43Q96BQ3 446 aaPredicted RBP4.23□□□□□ -1.73
CCDC7-211ENST00000638889 NMD3Q96D46 503 aaKnown RBP4.23□□□□□ -1.73
CCDC7-211ENST00000638889 VPS50Q96JG6 964 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 CTAGE1Q96RT6 745 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 ACO2Q99798 780 aaKnown RBP4.23□□□□□ -1.73
CCDC7-211ENST00000638889 RHOBTB2Q9BYZ6 727 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 FAM83DQ9H4H8 585 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 MLXIPQ9HAP2 919 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 TMEM8AQ9HCN3 771 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 SEMA5BQ9P283 1151 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 STEAP1Q9UHE8 339 aa4.23□□□□□ -1.73
CCDC7-211ENST00000638889 AQP7P3A6NL99 342 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 ISM1B1AKI9 464 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 H7C4K7 107 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 FYB1O15117 783 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 TBX3O15119 743 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 PIAS2O75928 621 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 TNFRSF1BP20333 461 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 IL6STP40189 918 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-211ENST00000638889 GPC5P78333 572 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 TXNL4AP83876 142 aaKnown RBP4.22□□□□□ -1.73
CCDC7-211ENST00000638889 ARHGEF7Q14155 803 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 NPNTQ6UXI9 565 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 PPP1R35Q8TAP8 253 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 SMCR8Q8TEV9 937 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-211ENST00000638889 STAG1Q8WVM7 1258 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 NLRP4Q96MN2 994 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 CAMK1GQ96NX5 476 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 TAAR9Q96RI9 348 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 ZCWPW1Q9H0M4 648 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 RIMKLBQ9ULI2 386 aa4.22□□□□□ -1.73
CCDC7-211ENST00000638889 TTBK1Q5TCY1 1321 aaPredicted RBP4.21□□□□□ -1.73
CCDC7-211ENST00000638889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 GTPBP1O00178 669 aaKnown RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 AKAP10O43572 662 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 TUSC2O75896 110 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 RASSF9O75901 435 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 PLAUP00749 431 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 FGF2P09038 288 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 PARP1P09874 1014 aaKnown RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 HGFP14210 728 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 ANAPC15P60006 121 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 DEUP1Q05D60 604 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 PIN1Q13526 163 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 CLCA4Q14CN2 919 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 MANEAQ5SRI9 462 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 ZNF793Q6ZN11 406 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 SKAP1Q86WV1 359 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 RBMXL3Q8N7X1 1067 aaKnown RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 FAM71DQ8N9W8 422 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 P2RY11Q96G91 374 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 CINPQ9BW66 212 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 NUAK2Q9H093 628 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 USP29Q9HBJ7 922 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 TYW1Q9NV66 732 aaKnown RBP4.21□□□□□ -1.74
CCDC7-211ENST00000638889 ASAP1Q9ULH1 1129 aa4.21□□□□□ -1.74
CCDC7-211ENST00000638889 hCG_2014768A0A024R1R8 64 aa4.2□□□□□ -1.74
CCDC7-211ENST00000638889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms