RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 GPRIN1Q7Z2K8 1008 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 BBS7Q8IWZ6 715 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 TIGD1Q96MW7 591 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 DUSP9Q99956 384 aaKnown RBP18.89■□□□□ 0.61
PNKP-225ENST00000636214 POLMQ9NP87 494 aaPredicted RBP18.89■□□□□ 0.61
PNKP-225ENST00000636214 CYLDQ9NQC7 956 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 CISHQ9NSE2 258 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 DEC1Q9P2X7 70 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 ARMCX3Q9UH62 379 aaPredicted RBP18.89■□□□□ 0.61
PNKP-225ENST00000636214 DNMT3LQ9UJW3 386 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 EML5Q05BV3 1969 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 NCOR2Q9Y618 2525 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 A0A1W2PQH9 124 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 KLF8O95600 359 aaPredicted RBP18.88■□□□□ 0.61
PNKP-225ENST00000636214 RARGP13631 454 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 TIE1P35590 1138 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 PPP1R2P41236 205 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 TNFRSF4P43489 277 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 ATXN1P54253 815 aaKnown RBP18.88■□□□□ 0.61
PNKP-225ENST00000636214 EOGTQ5NDL2 527 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 TRMT11Q7Z4G4 463 aaKnown RBP18.88■□□□□ 0.61
PNKP-225ENST00000636214 C12orf40Q86WS4 652 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 NAT16Q8N8M0 369 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 TXNDC5Q8NBS9 432 aaKnown RBP18.88■□□□□ 0.61
PNKP-225ENST00000636214 WHAMMQ8TF30 809 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 SEMA4DQ92854 862 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 TMEM176AQ96HP8 235 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 XPO6Q96QU8 1125 aaKnown RBP18.88■□□□□ 0.61
PNKP-225ENST00000636214 BCCIPQ9P287 314 aaKnown RBP eCLIP18.88■□□□□ 0.61
PNKP-225ENST00000636214 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
PNKP-225ENST00000636214 PCDHGA5Q9Y5G8 931 aa18.88■□□□□ 0.61
PNKP-225ENST00000636214 HOXC11O43248 304 aaPredicted RBP18.87■□□□□ 0.61
PNKP-225ENST00000636214 TBX18O95935 607 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 PLA2G4AP47712 749 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 KIF11P52732 1056 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 CRY1Q16526 586 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 PLK5Q496M5 336 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 CCDC40Q4G0X9 1142 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 ANKRD40Q6AI12 368 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 KLHDC10Q6PID8 442 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 ARHGAP18Q8N392 663 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 ENGASEQ8NFI3 743 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
PNKP-225ENST00000636214 ZC3H10Q96K80 434 aaKnown RBP18.87■□□□□ 0.61
PNKP-225ENST00000636214 CNOT6LQ96LI5 555 aaKnown RBP18.87■□□□□ 0.61
PNKP-225ENST00000636214 KLF16Q9BXK1 252 aaPredicted RBP18.87■□□□□ 0.61
PNKP-225ENST00000636214 TPSD1Q9BZJ3 242 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 METTL14Q9HCE5 456 aaKnown RBP18.87■□□□□ 0.61
PNKP-225ENST00000636214 HESX1Q9UBX0 185 aa18.87■□□□□ 0.61
PNKP-225ENST00000636214 CNOT1A5YKK6 2376 aaKnown RBP18.86■□□□□ 0.61
PNKP-225ENST00000636214 HHLA1C9JL84 531 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 ZBTB24O43167 697 aaPredicted RBP18.86■□□□□ 0.61
PNKP-225ENST00000636214 CETN1Q12798 172 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 C10orf76Q5T2E6 689 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 IL31Q6EBC2 164 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 GRAMD4Q6IC98 578 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 HTR3DQ70Z44 454 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 RSRC2Q7L4I2 434 aaKnown RBP18.86■□□□□ 0.61
PNKP-225ENST00000636214 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 MIB1Q86YT6 1006 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 SPACA7Q96KW9 195 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 BBS2Q9BXC9 721 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 DNAJC17Q9NVM6 304 aaKnown RBP18.86■□□□□ 0.61
PNKP-225ENST00000636214 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.86■□□□□ 0.61
PNKP-225ENST00000636214 WDR35Q9P2L0 1181 aa18.86■□□□□ 0.61
PNKP-225ENST00000636214 MED19A0JLT2 244 aaPredicted RBP18.85■□□□□ 0.61
PNKP-225ENST00000636214 TRIM49BA6NDI0 452 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 SLC30A4O14863 429 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 TULP3O75386 442 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 ZNF806P0C7X5 589 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 CD19P15391 556 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 TBXAS1P24557 533 aaPredicted RBP18.85■□□□□ 0.61
PNKP-225ENST00000636214 MPLP40238 635 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 MCCD1P59942 119 aaPredicted RBP18.85■□□□□ 0.61
PNKP-225ENST00000636214 CREB5Q02930 508 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 CUL2Q13617 745 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 CBWD6Q4V339 395 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 CBWD3Q5JTY5 395 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 CBWD5Q5RIA9 395 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 TPGS1Q6ZTW0 290 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 TMEM25Q86YD3 366 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 ZNF513Q8N8E2 541 aaPredicted RBP18.85■□□□□ 0.61
PNKP-225ENST00000636214 IL17RCQ8NAC3 791 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 SLC4A11Q8NBS3 891 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 TATDN2Q93075 761 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 DHTKD1Q96HY7 919 aaPredicted RBP18.85■□□□□ 0.61
PNKP-225ENST00000636214 CEP63Q96MT8 703 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 ARID3AQ99856 593 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 NMUR1Q9HB89 426 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 VPS45Q9NRW7 570 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 RASAL2Q9UJF2 1139 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 NUDT5Q9UKK9 219 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 STRIP2Q9ULQ0 834 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 ZNF510Q9Y2H8 683 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 ABCA7Q8IZY2 2146 aa18.85■□□□□ 0.61
PNKP-225ENST00000636214 DNAH14Q0VDD8 3507 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 THADAQ6YHU6 1953 aa18.84■□□□□ 0.61
PNKP-225ENST00000636214 BICDL2A1A5D9 508 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms