RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PTPN2P17706 415 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 KCNA5P22460 613 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 VAV2P52735 878 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 RNASE9P60153 205 aaKnown RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 COL19A1Q14993 1142 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 CTC1Q2NKJ3 1217 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 TXLNBQ8N3L3 684 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 IRGQQ8WZA9 623 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 SMG7Q92540 1137 aaKnown RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 HLA-CQ95604 372 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 ZNF707Q96C28 371 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 TRMT2BQ96GJ1 504 aaKnown RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 SELENOOQ9BVL4 669 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 UBE2ZQ9H832 354 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 ZNF334Q9HCZ1 680 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 PARVAQ9NVD7 372 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 HCFC1R1Q9NWW0 138 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 UXTQ9UBK9 157 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 INTUQ9ULD6 942 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 A0A1W2PQH9 124 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CTAGE9A4FU28 777 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 RCCD1A6NED2 376 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 YJEFN3A6XGL0 299 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 E7ENQ6 273 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MAP2K7O14733 419 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CYP1A2P05177 515 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 KRT3P12035 628 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MYL4P12829 197 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 YWHAGP61981 247 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CLUL1Q15846 466 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 EFHC1Q5JVL4 640 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 DCUN1D2Q6PH85 259 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 HFE2Q6ZVN8 426 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 GRASPQ7Z6J2 395 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MON1AQ86VX9 555 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 SCML4Q8N228 414 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 C3orf20Q8ND61 904 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 FEZF2Q8TBJ5 459 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 RPGRIP1Q96KN7 1286 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MYRFLQ96LU7 910 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 AVENQ9NQS1 362 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 METTL5Q9NRN9 209 aaKnown RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 TRPM5Q9NZQ8 1165 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CTTNBP2NLQ9P2B4 639 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 DNMT3BQ9UBC3 853 aaKnown RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 SCINQ9Y6U3 715 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MTCL1Q9Y4B5 1905 aaKnown RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 A0A0U1RQJ8 604 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 FAM92AA1XBS5 289 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 LTFP02788 710 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 HOXB8P17481 243 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 PGFP49763 221 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 GSCP56915 257 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 YWHAZP63104 245 aaKnown RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 KIF5AQ12840 1032 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MAMLD1Q13495 774 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 TEX35Q5T0J7 233 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 BSPRYQ5W0U4 402 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 PLEKHA7Q6IQ23 1121 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 SYCE2Q6PIF2 218 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 SLC26A9Q7LBE3 791 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 BHLHA9Q7RTU4 235 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 SCD5Q86SK9 330 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 TMC8Q8IU68 726 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 ARHGAP18Q8N392 663 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 PDZD8Q8NEN9 1154 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CMASQ8NFW8 434 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 ATRIPQ8WXE1 791 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MCEEQ96PE7 176 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 GCNAQ96QF7 691 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 NAPGQ99747 312 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 NUP85Q9BW27 656 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 LACRTQ9GZZ8 138 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 MRPL47Q9HD33 250 aaKnown RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 TLR8Q9NR97 1041 aaKnown RBP15.12■□□□□ 0.01
LINC00339-208ENST00000634934 PSD3Q9NYI0 1048 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 CLEC1BQ9P126 229 aa15.12■□□□□ 0.01
LINC00339-208ENST00000634934 A0A0C4DFX4 3053 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 PATJQ8NI35 1801 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 NCANO14594 1321 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 TCRBV5S1A1TA0A578 114 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 SIGLEC16A6NMB1 481 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 CAPN9O14815 690 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 HSF2BPO75031 334 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 RHOP08100 348 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 POU2F2P09086 479 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 GABRR2P28476 465 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 SCNN1AP37088 669 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 ARHGAP25P42331 645 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 NTHL1P78549 312 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 PABPC1LQ4VXU2 614 aaKnown RBP15.11■□□□□ 0.01
LINC00339-208ENST00000634934 BTBD8Q5XKL5 378 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 PDZD4Q76G19 769 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-208ENST00000634934 EMC1Q8N766 993 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 OVCA2Q8WZ82 227 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms