RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 KLF16Q9BXK1 252 aaPredicted RBP16.49■□□□□ 0.23
LINC00339-207ENST00000634712 ULBP1Q9BZM6 244 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 CNTN6Q9UQ52 1028 aa16.49■□□□□ 0.23
LINC00339-207ENST00000634712 CACNA1IQ9P0X4 2223 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 LETM1O95202 739 aaPredicted RBP16.48■□□□□ 0.23
LINC00339-207ENST00000634712 ADH1CP00326 375 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 CALCAP01258 141 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 GNA15P30679 374 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 CXCL12P48061 93 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 RGS7P49802 495 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 CCR3P51677 355 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 ZNF132P52740 706 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 DHCR24Q15392 516 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 TMEM196Q5HYL7 178 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 PM20D1Q6GTS8 502 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 ZC3H14Q6PJT7 736 aaKnown RBP16.48■□□□□ 0.23
LINC00339-207ENST00000634712 ALYREFQ86V81 257 aaKnown RBP16.48■□□□□ 0.23
LINC00339-207ENST00000634712 MIB1Q86YT6 1006 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 SPEM1Q8N4L4 309 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 ZNF276Q8N554 614 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 CHFRQ96EP1 664 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 PHOX2BQ99453 314 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 RASAL2Q9UJF2 1139 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 STRIP2Q9ULQ0 834 aa16.48■□□□□ 0.23
LINC00339-207ENST00000634712 MDM4O15151 490 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 THAP12O43422 761 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 CYP17A1P05093 508 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 NBL1P41271 181 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 COG7P83436 770 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 EFEMP1Q12805 493 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 CCINQ13939 588 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 ZNF528Q3MIS6 628 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 PKDCCQ504Y2 493 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 MIIPQ5JXC2 388 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 FSTL4Q6MZW2 842 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 MAMSTRQ6ZN01 415 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 HTR3DQ70Z44 454 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 BBS7Q8IWZ6 715 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 RNF139Q8WU17 664 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 SLC35F5Q8WV83 523 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 GOLGA1Q92805 767 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 HSFY1Q96LI6 401 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 ZSWIM1Q9BR11 485 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 CNGB3Q9NQW8 809 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 DNAJC12Q9UKB3 198 aa16.47■□□□□ 0.23
LINC00339-207ENST00000634712 ATG13O75143 517 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 EGFP01133 1207 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 ADH5P11766 374 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
LINC00339-207ENST00000634712 MRE11P49959 708 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 NRLP54845 237 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 APBA1Q02410 837 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 GAD2Q05329 585 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 FBXO43Q4G163 708 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 LY6G5CQ5SRR4 150 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 PMF1Q6P1K2 205 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 RHBDF2Q6PJF5 856 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 Q6ZS52 159 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 MAML2Q8IZL2 1156 aaPredicted RBP16.46■□□□□ 0.23
LINC00339-207ENST00000634712 CCDC26Q8TAB7 109 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 ZNF606Q8WXB4 792 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 NDRG1Q92597 394 aaKnown RBP16.46■□□□□ 0.23
LINC00339-207ENST00000634712 NAT10Q9H0A0 1025 aaKnown RBP16.46■□□□□ 0.23
LINC00339-207ENST00000634712 VPS16Q9H269 839 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 ST7Q9NRC1 585 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 OLA1Q9NTK5 396 aaKnown RBP16.46■□□□□ 0.23
LINC00339-207ENST00000634712 FANCLQ9NW38 375 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 TAB2Q9NYJ8 693 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 MARCH2Q9P0N8 246 aa16.46■□□□□ 0.23
LINC00339-207ENST00000634712 PIK3R2O00459 728 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 FBXO21O94952 628 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 HMBSP08397 361 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 MYL5Q02045 173 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 PTK2Q05397 1052 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 ANO4Q32M45 955 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 BSPRYQ5W0U4 402 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 SMYD5Q6GMV2 418 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 CAVIN1Q6NZI2 390 aaKnown RBP16.45■□□□□ 0.22
LINC00339-207ENST00000634712 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 C11orf57Q6ZUT1 292 aaPredicted RBP16.45■□□□□ 0.22
LINC00339-207ENST00000634712 SCML4Q8N228 414 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 SHC3Q92529 594 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 DCLK3Q9C098 648 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 FBRSL1Q9HCM7 1045 aaKnown RBP16.45■□□□□ 0.22
LINC00339-207ENST00000634712 PRMT8Q9NR22 394 aaPredicted RBP16.45■□□□□ 0.22
LINC00339-207ENST00000634712 SPHK2Q9NRA0 654 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 ABCC13Q9NSE7 274 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 ZNF510Q9Y2H8 683 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 R4GN57 208 aa16.45■□□□□ 0.22
LINC00339-207ENST00000634712 SLC12A8A0AV02 714 aa16.44■□□□□ 0.22
LINC00339-207ENST00000634712 ACADSBP45954 432 aa16.44■□□□□ 0.22
LINC00339-207ENST00000634712 DAOAP59103 153 aa16.44■□□□□ 0.22
LINC00339-207ENST00000634712 SATB1Q01826 763 aa16.44■□□□□ 0.22
LINC00339-207ENST00000634712 TYRO3Q06418 890 aa16.44■□□□□ 0.22
LINC00339-207ENST00000634712 RAPGEF1Q13905 1077 aa16.44■□□□□ 0.22
LINC00339-207ENST00000634712 GAS6Q14393 721 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms