RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	RBL1	P28749	1068 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	HOXA11	P31270	313 aa	Predicted RBP	13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	GRK4	P32298	578 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	GPD2	P43304	727 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	NDUFV1	P49821	464 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	DPY19L2P1	Q6NXN4	242 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	BHMT	Q93088	406 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	APOL2	Q9BQE5	337 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	ADAMTS10	Q9H324	1103 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	SIPA1L1	O43166	1804 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	E2F8	A0AVK6	867 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	RIPK2	O43353	540 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	CLNS1A	P54105	237 aa	Known RBP	13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	IFI35	P80217	286 aa	Predicted RBP	13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	ENPEP	Q07075	957 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	C10orf120	Q5SQS8	335 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	FBXO36	Q8NEA4	188 aa		13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	EMID1	Q96A84	441 aa	Predicted RBP	13.81	□□□□□ -0.2
NRXN1-233	ENST00000630543	DCDC2C	A8MYV0	355 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	FGFR1	P11362	822 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	STAT4	Q14765	748 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	RAPH1	Q70E73	1250 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	TTC30A	Q86WT1	665 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	SEPT8	Q92599	483 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	ATP2A3	Q93084	1043 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	MYLPF	Q96A32	169 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	SMARCD1	Q96GM5	515 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	UBP1	Q9NZI7	540 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	DDX20	Q9UHI6	824 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	MYBPHL	A2RUH7	354 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	GMNC	A6NCL1	334 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	CDH16	O75309	829 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	MTA2	O94776	668 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	STIP1	P31948	543 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	LSP1	P33241	339 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	SLC12A2	P55011	1212 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	TFB1M	Q8WVM0	346 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	PABPC5	Q96DU9	382 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	KCNK16	Q96T55	309 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	RNF186	Q9NXI6	227 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	CTNNAL1	Q9UBT7	734 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	DERA	Q9Y315	318 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	FKTN	O75072	461 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	GPR32	O75388	356 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	ALDH2	P05091	517 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	ALDH3A1	P30838	453 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	ACLY	P53396	1101 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	HADHB	P55084	474 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	EFEMP1	Q12805	493 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	NLRP14	Q86W24	1093 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	SREK1	Q8WXA9	508 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	GNE	Q9Y223	722 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	ITGBL1	O95965	494 aa	Predicted RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	PTK6	Q13882	451 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	MAPRE1	Q15691	268 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	TMCO4	Q5TGY1	634 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	FSD1L	Q9BXM9	530 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	RHOBTB2	Q9BYZ6	727 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	CXCL16	Q9H2A7	254 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	TRABD	Q9H4I3	376 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	GGT7	Q9UJ14	662 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	NAALADL1	Q9UQQ1	740 aa		13.8	□□□□□ -0.2
NRXN1-233	ENST00000630543	TMEM120B	A0PK00	339 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	PAPSS1	O43252	624 aa	Predicted RBP	13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	TTC4	O95801	387 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	AGT	P01019	485 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	LTF	P02788	710 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	IRF1	P10914	325 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	SSTR1	P30872	391 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	LRRC38	Q5VT99	294 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	FAM35A	Q86V20	835 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	CCDC197	Q8NCU1	140 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	PCDH9	Q9HC56	1237 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	KLHL14	Q9P2G3	628 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	GIT1	Q9Y2X7	761 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	KAT6A	Q92794	2004 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	IQANK1	A0A1B0GTG1	560 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	APOC4-APOC2	K7ER74	178 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	DNALI1	O14645	258 aa	Predicted RBP	13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	APOC2	P02655	101 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	PROZ	P22891	400 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	IL1R2	P27930	398 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	NRL	P54845	237 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	CFAP157	Q5JU67	520 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	KCNT2	Q6UVM3	1135 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	CTU1	Q7Z7A3	348 aa	Known RBP	13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	UNC45B	Q8IWX7	931 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	PIWIL1	Q96J94	861 aa	Known RBP	13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	SCYL1	Q96KG9	808 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	TRPC7	Q9HCX4	862 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	BAIAP2L1	Q9UHR4	511 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	TLL2	Q9Y6L7	1015 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	GOT1	P17174	413 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	SOX4	Q06945	474 aa	Predicted RBP	13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	PDK1	Q15118	436 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	KLHL38	Q2WGJ6	581 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	BCO2	Q9BYV7	579 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	POPDC2	Q9HBU9	364 aa		13.79	□□□□□ -0.2
NRXN1-233	ENST00000630543	CLGN	O14967	610 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms