RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 HHLA1C9JL84 531 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 AOC2O75106 756 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 DAB1O75553 588 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 GCATO75600 419 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ZNF189O75820 626 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 BEST1O76090 585 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CTSHP09668 335 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 FAM200BP0CF97 657 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ODC1P11926 461 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 COL6A1P12109 1028 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ELNP15502 786 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 TYMPP19971 482 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 IGFBP6P24592 240 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 TKTP29401 623 aaKnown RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 ATP5DP30049 168 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 MAP2K2P36507 400 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 MLH1P40692 756 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 HCAR3P49019 387 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 VPS41P49754 854 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ATP1A2P50993 1020 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 SCNN1GP51170 649 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 AFF1P51825 1210 aaKnown RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 PRMT2P55345 433 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 BCAR1P56945 870 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 DYNLT1P63172 113 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 IFI35P80217 286 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 ROR1Q01973 937 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 GRIK3Q13003 919 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 NR1H3Q13133 447 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 MMRN1Q13201 1228 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 TUSC3Q13454 348 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ARHGEF6Q15052 776 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CA9Q16790 459 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CDO1Q16878 200 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 TIGD5Q53EQ6 642 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ZC3H12AQ5D1E8 599 aaKnown RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 DNAJC21Q5F1R6 531 aaKnown RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 MDH1BQ5I0G3 518 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 KIAA0319Q5VV43 1072 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 LHX8Q68G74 356 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PM20D1Q6GTS8 502 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 DARS2Q6PI48 645 aaKnown RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 TRAF7Q6Q0C0 670 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CLEC20AQ6ZU45 233 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CENPUQ71F23 418 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 BZW1Q7L1Q6 419 aaKnown RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 BEND5Q7L4P6 421 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 TAOK1Q7L7X3 1001 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 RTN4RL1Q86UN2 441 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 EXOC3L1Q86VI1 746 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 METTL23Q86XA0 190 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ECHDC2Q86YB7 292 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 DEFB106AQ8N104 65 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 RIBC1Q8N443 379 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 CLEC4CQ8WTT0 213 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 IRGQQ8WZA9 623 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CPT1BQ92523 772 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PRCCQ92733 491 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 LPPQ93052 612 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PGAP3Q96FM1 320 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 GLT1D1Q96MS3 346 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PWWP2AQ96N64 755 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PKMYT1Q99640 499 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 SMOQ99835 787 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ADAM2Q99965 735 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 SYT15Q9BQS2 421 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 MED10Q9BTT4 135 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 OSBPL7Q9BZF2 842 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CCDC134Q9H6E4 229 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 NRDE2Q9H7Z3 1164 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 LRRC4Q9HBW1 653 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 LRRC4CQ9HCJ2 640 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CSNK1G1Q9HCP0 422 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 SAYSD1Q9NPB0 183 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 CNGB3Q9NQW8 809 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 EURLQ9NYK6 297 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 PAK5Q9P286 719 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 GGA2Q9UJY4 613 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 FZD10Q9ULW2 581 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 STAP1Q9ULZ2 295 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 ACTL7BQ9Y614 415 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 SRCAPQ6ZRS2 3230 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 C5orf60A6NFR6 353 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ERICH4A6NGS2 130 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 DCDC2CA8MYV0 355 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 HACD1B0YJ81 288 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 H7C0C1 242 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 TMEM189-UBE2V1I3L0A0 370 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CLDN5O00501 218 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CHADO15335 359 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 TRAPPC3O43617 180 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 CDH16O75309 829 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 AP1G2O75843 785 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 DGKIO75912 1065 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 ACSL3O95573 720 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 FAM107AO95990 144 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 F9P00740 461 aa5.78□□□□□ -1.48
NEK3-211ENST00000629912 IFNB1P01574 187 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms