RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 ZNF487B1APH4 448 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 NDC80O14777 642 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 MDM4O15151 490 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 GLUD1P00367 558 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 KRT1P04264 644 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 OR4Q2P0C623 313 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 USP17L7P0C7H9 530 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 PFKLP17858 780 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 DNAJB2P25686 324 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 BMP8BP34820 402 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 HTR7P34969 479 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 ARL4AP40617 200 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 EPHB4P54760 987 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 DUSP4Q13115 394 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 NNTQ13423 1086 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 KRT81Q14533 505 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 LONRF2Q1L5Z9 754 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 GLE1Q53GS7 698 aaKnown RBP10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TFDP3Q5H9I0 405 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 EFHC2Q5JST6 749 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 BRMS1LQ5PSV4 323 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 BSPRYQ5W0U4 402 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 SCYL2Q6P3W7 929 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 PDZD4Q76G19 769 aaPredicted RBP10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TMEM173Q86WV6 379 aaPredicted RBP10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 DNAAF5Q86Y56 855 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 ZNF276Q8N554 614 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 ATAD1Q8NBU5 361 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 KCTD6Q8NC69 237 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 ZMIZ2Q8NF64 920 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 FAM172AQ8WUF8 416 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 RNF34Q969K3 372 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TRMT2BQ96GJ1 504 aaKnown RBP10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TMEM209Q96SK2 561 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 CLSTN3Q9BQT9 956 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 NACA2Q9H009 215 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 FAM204AQ9H8W3 233 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 ZWILCHQ9H900 591 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TMLHEQ9NVH6 421 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 TRPM5Q9NZQ8 1165 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 RCOR3Q9P2K3 495 aaPredicted RBP10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 NLRC5Q86WI3 1866 aa10.59□□□□□ -0.71
FOXCUT-201ENST00000628509 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 HHLA1C9JL84 531 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 M0QYT0 321 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 TULP2O00295 520 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 XYLBO75191 536 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 LRCH4O75427 683 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 BEST1O76090 585 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 APOEP02649 317 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 TUBP50607 506 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 DNA2P51530 1060 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 ERVK-21P61565 698 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 ATP11AP98196 1134 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 IFRD2Q12894 506 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 SHHQ15465 462 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 CDO1Q16878 200 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 ERMARDQ5T6L9 678 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 ZNF572Q7Z3I7 529 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 TMCO2Q7Z6W1 182 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 DEFB106AQ8N104 65 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 RASGEF1CQ8N431 466 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 EMC1Q8N766 993 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 MRPL43Q8N983 215 aaKnown RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 SLC7A14Q8TBB6 771 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 GRK7Q8WTQ7 553 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 BCL7CQ8WUZ0 217 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 POF1BQ8WVV4 589 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 RUBCNQ92622 972 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 CENPIQ92674 756 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 CD101Q93033 1021 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 HAUS1Q96CS2 278 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 BTBD6Q96KE9 485 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 ZNF512Q96ME7 567 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 CFAP57Q96MR6 1250 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 CDCA3Q99618 268 aaPredicted RBP10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 WDCPQ9H6R7 721 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 IL37Q9NZH6 218 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 STIM2Q9P246 746 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 RASAL2Q9UJF2 1139 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 KIAA1671Q9BY89 1806 aa10.58□□□□□ -0.72
FOXCUT-201ENST00000628509 FAM92AA1XBS5 289 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 SLC38A8A6NNN8 435 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 SOBPA7XYQ1 873 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 H3BNC9 293 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 PIK3R2O00459 728 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 KRIT1O00522 736 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 TNFRSF10BO14763 440 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 TEX28O15482 410 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 DDX3YO15523 660 aaKnown RBP10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 NCK2O43639 380 aa10.57□□□□□ -0.72
FOXCUT-201ENST00000628509 GRAP2O75791 330 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms