RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 OSER1Q9NX31 292 aa23.5■■□□□ 1.35
SF1-220ENST00000626028 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.5■■□□□ 1.35
SF1-220ENST00000626028 MYO18AQ92614 2054 aaKnown RBP23.5■■□□□ 1.35
SF1-220ENST00000626028 WDR87Q6ZQQ6 2873 aa23.5■■□□□ 1.35
SF1-220ENST00000626028 PTPRZ1P23471 2315 aaPredicted RBP23.49■■□□□ 1.35
SF1-220ENST00000626028 LILRB5O75023 590 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 ZBED1O96006 694 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 MTIF2P46199 727 aaKnown RBP23.49■■□□□ 1.35
SF1-220ENST00000626028 TKTL1P51854 596 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 MFAP3P55082 362 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 MAN2A1Q16706 1144 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 PREPLQ4J6C6 727 aaPredicted RBP23.49■■□□□ 1.35
SF1-220ENST00000626028 RRAGAQ7L523 313 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 SCD5Q86SK9 330 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 ARHGEF19Q8IW93 802 aa23.49■■□□□ 1.35
SF1-220ENST00000626028 RBBP8NLQ8NC74 664 aaPredicted RBP23.49■■□□□ 1.35
SF1-220ENST00000626028 LSM7Q9UK45 103 aaKnown RBP23.49■■□□□ 1.35
SF1-220ENST00000626028 DMDP11532 3685 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.48■■□□□ 1.35
SF1-220ENST00000626028 MBD3O95983 291 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 LMNAP02545 664 aaKnown RBP23.48■■□□□ 1.35
SF1-220ENST00000626028 COG7P83436 770 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 EXOC3L4Q17RC7 722 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 C10orf120Q5SQS8 335 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 CREBRFQ8IUR6 639 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 SLC35F5Q8WV83 523 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 TFAP2BQ92481 460 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 KAT5Q92993 513 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 KREMEN1Q96MU8 473 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 UBE2TQ9NPD8 197 aaPredicted RBP23.48■■□□□ 1.35
SF1-220ENST00000626028 CNGB3Q9NQW8 809 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 OLA1Q9NTK5 396 aaKnown RBP23.48■■□□□ 1.35
SF1-220ENST00000626028 SPAG17Q6Q759 2223 aa23.48■■□□□ 1.35
SF1-220ENST00000626028 RNF225M0QZC1 329 aaPredicted RBP23.47■■□□□ 1.35
SF1-220ENST00000626028 HOXC11O43248 304 aaPredicted RBP23.47■■□□□ 1.35
SF1-220ENST00000626028 TBX18O95935 607 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 OPRD1P41143 372 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 GAD2Q05329 585 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 GAB4Q2WGN9 574 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 RHBDF2Q6PJF5 856 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 Q6ZS52 159 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 GPT2Q8TD30 523 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 APEX2Q9UBZ4 518 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 ZNF510Q9Y2H8 683 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 R4GN57 208 aa23.47■■□□□ 1.35
SF1-220ENST00000626028 A0A0A0MRY4 1105 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 CCDC163A0A0D9SF12 145 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 MED7O43513 233 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 GREM1O60565 184 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 EGFP01133 1207 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 ADH5P11766 374 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 CNR2P34972 360 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 YWHAGP61981 247 aaKnown RBP eCLIP23.46■■□□□ 1.35
SF1-220ENST00000626028 SATB1Q01826 763 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 OTOGLQ3ZCN5 2332 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 ASCL5Q7RTU5 278 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 SIX6OS1Q8N1H7 587 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 HSFY1Q96LI6 401 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 FBRSL1Q9HCM7 1045 aaKnown RBP23.46■■□□□ 1.35
SF1-220ENST00000626028 ZNF292O60281 2723 aa23.46■■□□□ 1.35
SF1-220ENST00000626028 FRYLO94915 3013 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 EEF1GP26641 437 aaKnown RBP23.45■■□□□ 1.34
SF1-220ENST00000626028 LY6G5CQ5SRR4 150 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 BTBD8Q5XKL5 378 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 BBS7Q8IWZ6 715 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 UBA3Q8TBC4 463 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 IRGQQ8WZA9 623 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 ACDQ96AP0 544 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 TUBGCP2Q9BSJ2 902 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 ULBP1Q9BZM6 244 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 DCLK3Q9C098 648 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 SPHK2Q9NRA0 654 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 STRIP2Q9ULQ0 834 aa23.45■■□□□ 1.34
SF1-220ENST00000626028 EML5Q05BV3 1969 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 K7ESF4 209 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 RNF40O75150 1001 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 FBXO21O94952 628 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 KRT5P13647 590 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 PON1P27169 355 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 ADIGQ0VDE8 80 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 HSF5Q4G112 596 aaPredicted RBP23.44■■□□□ 1.34
SF1-220ENST00000626028 NUDT18Q6ZVK8 323 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 RSRC2Q7L4I2 434 aaKnown RBP23.44■■□□□ 1.34
SF1-220ENST00000626028 CAMKK1Q8N5S9 505 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 ENOX1Q8TC92 643 aaKnown RBP23.44■■□□□ 1.34
SF1-220ENST00000626028 STK32AQ8WU08 396 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 PNKPQ96T60 521 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 ZSWIM1Q9BR11 485 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 CRACR2AQ9BSW2 395 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 EPC1Q9H2F5 836 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 NDST4Q9H3R1 872 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 ABCC13Q9NSE7 274 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 WDR35Q9P2L0 1181 aa23.44■■□□□ 1.34
SF1-220ENST00000626028 M0QYV0 167 aa23.43■■□□□ 1.34
SF1-220ENST00000626028 TULP2O00295 520 aa23.43■■□□□ 1.34
SF1-220ENST00000626028 STC2O76061 302 aa23.43■■□□□ 1.34
SF1-220ENST00000626028 IRF1P10914 325 aa23.43■■□□□ 1.34
SF1-220ENST00000626028 SLC9A1P19634 815 aa23.43■■□□□ 1.34
SF1-220ENST00000626028 RPL34P49207 117 aaKnown RBP23.43■■□□□ 1.34
SF1-220ENST00000626028 VWA3BQ502W6 1294 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms