RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SYNE4Q8N205 404 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 SIMC1Q8NDZ2 872 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 CSGALNACT1Q8TDX6 532 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 LINC00476Q8WZB0 136 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 HAS1Q92839 578 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PRR11Q96HE9 360 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PBKQ96KB5 322 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 UBXN10Q96LJ8 280 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 MECRQ9BV79 373 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 MMRN2Q9H8L6 949 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 KLC4Q9NSK0 619 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 TMOD4Q9NZQ9 345 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 HERC5Q9UII4 1024 aaKnown RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 REXO2Q9Y3B8 237 aaKnown RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PNMA6EA0A0J9YXQ4 647 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 HMX3A6NHT5 357 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 LINC00473A8K010 186 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 H0Y3Z8 333 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 M0QYT0 321 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 MGST3O14880 152 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CTIFO43310 598 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CA12O43570 354 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 NARSO43776 548 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 SNX2O60749 519 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 PEPDP12955 493 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 HSD3B1P14060 373 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 TGM1P22735 817 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 FPR3P25089 353 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 GKP32189 559 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 ADD2P35612 726 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 MAPK9P45984 424 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CCT5P48643 541 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 ARL4CP56559 192 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 EIF4A1P60842 406 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 AP2B1P63010 937 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 FOXI1Q12951 378 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 LSM12Q3MHD2 195 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 TEDDM1Q5T9Z0 273 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 RINT1Q6NUQ1 792 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CYP26C1Q6V0L0 522 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 Q6ZNX1 250 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 PRRT2Q7Z6L0 340 aaPredicted RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CPOQ8IVL8 374 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 HERC6Q8IVU3 1022 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CLASRPQ8N2M8 674 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 BEND2Q8NDZ0 799 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 SPPL3Q8TCT6 385 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 ABHD5Q8WTS1 349 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 XAGE5Q8WWM1 108 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 THAP4Q8WY91 577 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 FBXL20Q96IG2 436 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 PGBD1Q96JS3 809 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 EIF2AK1Q9BQI3 630 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 PAGR1Q9BTK6 254 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 ZNF747Q9BV97 191 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 ALG8Q9BVK2 526 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 VPS16Q9H269 839 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 SEPSECSQ9HD40 501 aaKnown RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 GGA3Q9NZ52 723 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 C9orf78Q9NZ63 289 aaPredicted RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 EHD3Q9NZN3 535 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 STEAP1Q9UHE8 339 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 GTF2A1LQ9UNN4 478 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 USP22Q9UPT9 525 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 CNTN6Q9UQ52 1028 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 EPN1Q9Y6I3 576 aaPredicted RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 ARHGEF17Q96PE2 2063 aaPredicted RBP3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 MAST3O60307 1309 aa3.19□□□□□ -1.9
SCARNA4-202ENST00000625402 LOC105369274A0A096LPK9 316 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 LOC102723532A0A0G2JNH3 316 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 RRN3P2A6NIE6 340 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 SLC38A8A6NNN8 435 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 A8MVJ9 347 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 NPIPB8E9PQR5 432 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 H0YIZ8 118 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 AP4M1O00189 453 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 NPHP1O15259 732 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 MPPED1O15442 326 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 IRAK2O43187 625 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 PEX1O43933 1283 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 PMPCBO75439 489 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 URI1O94763 535 aaPredicted RBP3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 MBPP02686 304 aaPredicted RBP3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 TMEM225BP0DP42 221 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 NR2F6P10588 404 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 ALADP13716 330 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 ZFXP17010 805 aaPredicted RBP3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 KRT4P19013 534 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 ADRA1BP35368 520 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 FOLR3P41439 243 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 DIO1P49895 249 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 POU5F1BQ06416 359 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 SF3A3Q12874 501 aaKnown RBP eCLIP3.18□□□□□ -1.9not detected■□□□□ 9.7
SCARNA4-202ENST00000625402 PTPRRQ15256 657 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 GALNTL6Q49A17 601 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 LY6G5CQ5SRR4 150 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 LAIR1Q6GTX8 287 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 C16orf89Q6UX73 402 aa3.18□□□□□ -1.9
SCARNA4-202ENST00000625402 Q6ZWC4 215 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms