RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ZBTB24O43167 697 aaPredicted RBP20.05■□□□□ 0.8
SMN1-211ENST00000625245 TBX18O95935 607 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 TOP3BO95985 862 aaKnown RBP20.05■□□□□ 0.8
SMN1-211ENST00000625245 CFIP05156 583 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 C1QTNF9P0C862 333 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 HOXB2P14652 356 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 ENGP17813 658 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 ITPKAP23677 461 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 ADORA2BP29275 332 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 CLDN10P78369 228 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 RPL6Q02878 288 aaKnown RBP20.05■□□□□ 0.8
SMN1-211ENST00000625245 STK4Q13043 487 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 GRAMD4Q6IC98 578 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 TPGS1Q6ZTW0 290 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 C12orf29Q8N999 325 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 DMAC2Q9NW81 257 aa20.05■□□□□ 0.8
SMN1-211ENST00000625245 NEDD8-MDP1E9PL57 170 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 AP5Z1O43299 807 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 RPN1P04843 607 aaKnown RBP20.04■□□□□ 0.8
SMN1-211ENST00000625245 ZSCAN22P10073 491 aaPredicted RBP20.04■□□□□ 0.8
SMN1-211ENST00000625245 GABRG2P18507 467 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 NTSR1P30989 418 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 DPP6P42658 865 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 SPDYCQ5MJ68 293 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 SPOPLQ6IQ16 392 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 SDE2Q6IQ49 451 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 UNQ6494/PRO21346Q6UXR6 183 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 MIB1Q86YT6 1006 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 CRYBG2Q8N1P7 616 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 KIAA0895Q8NCT3 520 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 XPO6Q96QU8 1125 aaKnown RBP20.04■□□□□ 0.8
SMN1-211ENST00000625245 BBS2Q9BXC9 721 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 KLF16Q9BXK1 252 aaPredicted RBP20.04■□□□□ 0.8
SMN1-211ENST00000625245 FSCN3Q9NQT6 498 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 CALCOCO1Q9P1Z2 691 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 LSM7Q9UK45 103 aaKnown RBP20.04■□□□□ 0.8
SMN1-211ENST00000625245 PILRBQ9UKJ0 227 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 HCN2Q9UL51 889 aa20.04■□□□□ 0.8
SMN1-211ENST00000625245 KLRC4O43908 158 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 F13A1P00488 732 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 NR3C1P04150 777 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 FAM200BP0CF97 657 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 ATP5C1P36542 298 aaKnown RBP20.03■□□□□ 0.8
SMN1-211ENST00000625245 ATXN3P54252 364 aaPredicted RBP20.03■□□□□ 0.8
SMN1-211ENST00000625245 GOLGA8FQ08AF8 430 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 GOLGA8DPQ0D2H9 430 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 ZACNQ401N2 412 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 KMT5BQ4FZB7 885 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 EGFLAMQ63HQ2 1017 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 CEP135Q66GS9 1140 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 SLC23A3Q6PIS1 610 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 SLC36A4Q6YBV0 504 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 HTR3DQ70Z44 454 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 SV2AQ7L0J3 742 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 UNC93AQ86WB7 457 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 SLC9A9Q8IVB4 645 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 CHPFQ8IZ52 775 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 TAF4BQ92750 862 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 PAGE5Q96GU1 130 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 GTPBP2Q9BX10 602 aaKnown RBP20.03■□□□□ 0.8
SMN1-211ENST00000625245 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 SLC32A1Q9H598 525 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 CSNK1G1Q9HCP0 422 aa20.03■□□□□ 0.8
SMN1-211ENST00000625245 RALYQ9UKM9 306 aaKnown RBP20.03■□□□□ 0.8
SMN1-211ENST00000625245 HSP90AA1P07900 732 aaKnown RBP20.02■□□□□ 0.8
SMN1-211ENST00000625245 SLFN14P0C7P3 912 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 TYRP14679 529 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 TRIM21P19474 475 aaKnown RBP20.02■□□□□ 0.8
SMN1-211ENST00000625245 PIK3CAP42336 1068 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 DUOXA1Q1HG43 343 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 KIAA1211LQ6NV74 962 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 GPRIN1Q7Z2K8 1008 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 TMC2Q8TDI7 906 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 ACOX2Q99424 681 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 DUSP9Q99956 384 aaKnown RBP20.02■□□□□ 0.8
SMN1-211ENST00000625245 SCNM1Q9BWG6 230 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 KCTD10Q9H3F6 313 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 WDR35Q9P2L0 1181 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 NUDT5Q9UKK9 219 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 SLC6A14Q9UN76 642 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 FRMD4BQ9Y2L6 1034 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 STARD13Q9Y3M8 1113 aa20.02■□□□□ 0.8
SMN1-211ENST00000625245 A0A1W2PQF6 199 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 MDM4O15151 490 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 CYP26A1O43174 497 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 ASS1P00966 412 aaKnown RBP20.01■□□□□ 0.79
SMN1-211ENST00000625245 HLA-DRAP01903 254 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 ACO1P21399 889 aaKnown RBP20.01■□□□□ 0.79
SMN1-211ENST00000625245 ASPAP45381 313 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 GFPT1Q06210 699 aaPredicted RBP20.01■□□□□ 0.79
SMN1-211ENST00000625245 ZNF33AQ06730 810 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 HDDC3Q8N4P3 179 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 IPO4Q8TEX9 1081 aaKnown RBP20.01■□□□□ 0.79
SMN1-211ENST00000625245 BHMTQ93088 406 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 CYFIP2Q96F07 1278 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 ADAM33Q9BZ11 813 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 OSER1Q9NX31 292 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 CFAP45Q9UL16 551 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 ZMIZ1Q9ULJ6 1067 aa20.01■□□□□ 0.79
SMN1-211ENST00000625245 CYP8B1Q9UNU6 501 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms