RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 BEST1O76090 585 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 CHRM1P11229 460 aaPredicted RBP23.31■■□□□ 1.32
SRRT-218ENST00000620394 RPL13P26373 211 aaKnown RBP23.31■■□□□ 1.32
SRRT-218ENST00000620394 MRPS21P82921 87 aaKnown RBP23.31■■□□□ 1.32
SRRT-218ENST00000620394 PPP3CAQ08209 521 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 ACAP1Q15027 740 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 DHCR24Q15392 516 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 EDRF1Q3B7T1 1238 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 HECTD3Q5T447 861 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 LPCAT2Q7L5N7 544 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 FAM186BQ8IYM0 893 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 TAS1R2Q8TE23 839 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 WHAMMQ8TF30 809 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 IMPG2Q9BZV3 1241 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 CYP3A43Q9HB55 503 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 APOBEC3GQ9HC16 384 aaKnown RBP23.31■■□□□ 1.32
SRRT-218ENST00000620394 TBC1D14Q9P2M4 693 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 MAPK8IP1Q9UQF2 711 aa23.31■■□□□ 1.32
SRRT-218ENST00000620394 E2F8A0AVK6 867 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 KRT13P13646 458 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 HOXB3P14651 431 aaPredicted RBP23.3■■□□□ 1.32
SRRT-218ENST00000620394 PSMC2P35998 433 aaKnown RBP23.3■■□□□ 1.32
SRRT-218ENST00000620394 GCLMP48507 274 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 ORC1Q13415 861 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 HSF5Q4G112 596 aaPredicted RBP23.3■■□□□ 1.32
SRRT-218ENST00000620394 OTUB2Q96DC9 234 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 TWNKQ96RR1 684 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 NIF3L1Q9GZT8 377 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 GDPD2Q9HCC8 539 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 TMEM8AQ9HCN3 771 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 FAM49BQ9NUQ9 324 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 GMIPQ9P107 970 aa23.3■■□□□ 1.32
SRRT-218ENST00000620394 GTF2H1P32780 548 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 P2RY2P41231 377 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 KIAA1211LQ6NV74 962 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 TTC30AQ86WT1 665 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 SYT12Q8IV01 421 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 CCDC33Q8N5R6 958 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 C12orf29Q8N999 325 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 HNRNPABQ99729 332 aaKnown RBP23.29■■□□□ 1.32
SRRT-218ENST00000620394 FBXO44Q9H4M3 255 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 CCSER2Q9H7U1 834 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 PNPLA8Q9NP80 782 aa23.29■■□□□ 1.32
SRRT-218ENST00000620394 ZFYVE26Q68DK2 2539 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 SCAMP3O14828 347 aaKnown RBP23.28■■□□□ 1.32
SRRT-218ENST00000620394 ZZEF1O43149 2961 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 CILPO75339 1184 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 ADH1CP00326 375 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 FAM200BP0CF97 657 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 TRIM21P19474 475 aaKnown RBP23.28■■□□□ 1.32
SRRT-218ENST00000620394 PI4KAP42356 2102 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 ADAM9Q13443 819 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 SPDYCQ5MJ68 293 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 RHBDF2Q6PJF5 856 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 CLEC20AQ6ZU45 233 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 CCDC34Q96HJ3 373 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 FAXDC2Q96IV6 333 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 NT5C1AQ9BXI3 368 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 POLMQ9NP87 494 aaPredicted RBP23.28■■□□□ 1.32
SRRT-218ENST00000620394 CHORDC1Q9UHD1 332 aaPredicted RBP23.28■■□□□ 1.32
SRRT-218ENST00000620394 PKD1L2Q7Z442 2459 aa23.28■■□□□ 1.32
SRRT-218ENST00000620394 HHLA1C9JL84 531 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 HYAL3O43820 417 aaPredicted RBP23.27■■□□□ 1.32
SRRT-218ENST00000620394 HOXD12P35452 270 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 MAPK8P45983 427 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 MAP3K7CLP57077 242 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 COBLL1Q53SF7 1204 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 TMEM92Q6UXU6 159 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 GPRIN1Q7Z2K8 1008 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 C12orf40Q86WS4 652 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 FMR1NBQ8N0W7 255 aaPredicted RBP23.27■■□□□ 1.32
SRRT-218ENST00000620394 ALLCQ8N6M5 410 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 CYLDQ9NQC7 956 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 BCCIPQ9P287 314 aaKnown RBP eCLIP23.27■■□□□ 1.32
SRRT-218ENST00000620394 CIZ1Q9ULV3 898 aaPredicted RBP23.27■■□□□ 1.32
SRRT-218ENST00000620394 MSRB2Q9Y3D2 182 aa23.27■■□□□ 1.32
SRRT-218ENST00000620394 CEP192Q8TEP8 1941 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 A0A0A0MRY4 1105 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 MAP3K13O43283 966 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 TLR5O60602 858 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 ADH5P11766 374 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 ENGP17813 658 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 PGFP49763 221 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 MESP2Q0VG99 397 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 BYSLQ13895 437 aaKnown RBP23.26■■□□□ 1.31
SRRT-218ENST00000620394 EOGTQ5NDL2 527 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 PEAR1Q5VY43 1037 aaPredicted RBP23.26■■□□□ 1.31
SRRT-218ENST00000620394 LYSMD4Q5XG99 296 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 KRT39Q6A163 491 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 SLC23A3Q6PIS1 610 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 ARMCX6Q7L4S7 300 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 SMYD4Q8IYR2 804 aaPredicted RBP23.26■■□□□ 1.31
SRRT-218ENST00000620394 PHTF2Q8N3S3 785 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 TXNDC5Q8NBS9 432 aaKnown RBP23.26■■□□□ 1.31
SRRT-218ENST00000620394 TLR8Q9NR97 1041 aaKnown RBP23.26■■□□□ 1.31
SRRT-218ENST00000620394 SCML2Q9UQR0 700 aa23.26■■□□□ 1.31
SRRT-218ENST00000620394 MYO18AQ92614 2054 aaKnown RBP23.25■■□□□ 1.31
SRRT-218ENST00000620394 WDFY3Q8IZQ1 3526 aa23.25■■□□□ 1.31
SRRT-218ENST00000620394 UPK3BL1B0FP48 263 aa23.25■■□□□ 1.31
SRRT-218ENST00000620394 UPK3BL2E5RIL1 263 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms