RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-224	ENST00000619186	CYLD	Q9NQC7	956 aa		11.32	□□□□□ -0.6
TP53-224	ENST00000619186	TUBGCP4	Q9UGJ1	667 aa		11.32	□□□□□ -0.6
TP53-224	ENST00000619186	SLC24A2	Q9UI40	661 aa		11.32	□□□□□ -0.6
TP53-224	ENST00000619186	HAO1	Q9UJM8	370 aa		11.32	□□□□□ -0.6
TP53-224	ENST00000619186	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.32	□□□□□ -0.6
TP53-224	ENST00000619186	STARD13	Q9Y3M8	1113 aa		11.32	□□□□□ -0.6
TP53-224	ENST00000619186	MCF2L	O15068	1137 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	RNF8	O76064	485 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	UNC5C	O95185	931 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	MCF2	P10911	925 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	CCNB1	P14635	433 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	PHKA2	P46019	1235 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	INCA1	Q0VD86	236 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	FAAP100	Q0VG06	881 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	ACVR2B	Q13705	512 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	KIZ	Q2M2Z5	673 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	ZNF618	Q5T7W0	954 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	OLFML1	Q6UWY5	402 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	SH2D5	Q6ZV89	423 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	LRRC6	Q86X45	466 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	PALM2	Q8IXS6	379 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	NPLOC4	Q8TAT6	608 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	ZIC5	Q96T25	663 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	EIF2A	Q9BY44	585 aa	Known RBP	11.31	□□□□□ -0.6
TP53-224	ENST00000619186	NFKBIZ	Q9BYH8	718 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	MIS12	Q9H081	205 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	ETNK1	Q9HBU6	452 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	SMYD2	Q9NRG4	433 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	DCTN4	Q9UJW0	460 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	TEX264	Q9Y6I9	313 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	ZSWIM8	A7E2V4	1837 aa		11.31	□□□□□ -0.6
TP53-224	ENST00000619186	KCNN4	O15554	427 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	PAPSS1	O43252	624 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	TOP3B	O95985	862 aa	Known RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	VDR	P11473	427 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	IGFBP6	P24592	240 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	GRIA1	P42261	906 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	MLLT3	P42568	568 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	ROR1	Q01973	937 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SLC10A2	Q12908	348 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	FAM187B	Q17R55	369 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	CES4A	Q5XG92	561 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	ZNF449	Q6P9G9	518 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	MTHFD1L	Q6UB35	978 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	LCLAT1	Q6UWP7	414 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	ANKRD23	Q86SG2	305 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	KIRREL3	Q8IZU9	778 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	CCDC110	Q8TBZ0	833 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	LRRC8C	Q8TDW0	803 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	NDRG1	Q92597	394 aa	Known RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	KIF12	Q96FN5	646 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	CFAP36	Q96G28	342 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	RNF157	Q96PX1	679 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	CNPY3	Q9BT09	278 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	KATNBL1	Q9H079	304 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	RAB6B	Q9NRW1	208 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SNTG2	Q9NY99	539 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	WDR35	Q9P2L0	1181 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SMG5	Q9UPR3	1016 aa	Known RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SNX9	Q9Y5X1	595 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	BPTF	Q12830	3046 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	CFAP73	A6NFT4	308 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186		H7C0C1	242 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	GM2A	P17900	193 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	HOXA11	P31270	313 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	PCK1	P35558	622 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	MSH2	P43246	934 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	ATP5O	P48047	213 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SLC26A2	P50443	739 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	HDAC4	P56524	1084 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	NR1H3	Q13133	447 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	PKDCC	Q504Y2	493 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	HHAT	Q5VTY9	493 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	RGS9BP	Q6ZS82	235 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	PCGF5	Q86SE9	256 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	CAND1	Q86VP6	1230 aa	Known RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	PDIK1L	Q8N165	341 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	MPP5	Q8N3R9	675 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	TTC13	Q8NBP0	860 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SHCBP1	Q8NEM2	672 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	FAM172A	Q8WUF8	416 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	LENG1	Q96BZ8	264 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	SNRNP25	Q9BV90	132 aa	Known RBP	11.3	□□□□□ -0.6
TP53-224	ENST00000619186	ASB7	Q9H672	318 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	RSAD1	Q9HA92	442 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	TMPRSS4	Q9NRS4	437 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186	ASNSD1	Q9NWL6	643 aa		11.3	□□□□□ -0.6
TP53-224	ENST00000619186		A0A1B0GUA9	196 aa		11.29	□□□□□ -0.6
TP53-224	ENST00000619186	RPSA	P08865	295 aa	Known RBP	11.29	□□□□□ -0.6
TP53-224	ENST00000619186	ALAD	P13716	330 aa		11.29	□□□□□ -0.6
TP53-224	ENST00000619186	ZNF157	P51786	506 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-224	ENST00000619186	SLC18A1	P54219	525 aa		11.29	□□□□□ -0.6
TP53-224	ENST00000619186	YARS	P54577	528 aa	Known RBP	11.29	□□□□□ -0.6
TP53-224	ENST00000619186	YWHAG	P61981	247 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
TP53-224	ENST00000619186	YWHAZ	P63104	245 aa	Known RBP	11.29	□□□□□ -0.6
TP53-224	ENST00000619186	GBE1	Q04446	702 aa		11.29	□□□□□ -0.6
TP53-224	ENST00000619186	PTK7	Q13308	1070 aa		11.29	□□□□□ -0.6
TP53-224	ENST00000619186	SMAD1	Q15797	465 aa	Known RBP	11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms