RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 RRN3P2A6NIE6 340 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PRPF4O43172 522 aaKnown RBP eCLIP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TOM1L1O75674 476 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ASMTLO95671 621 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 HOXD10P28358 340 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 APLP1P51693 650 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 BASP1P80723 227 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 SLC34A1Q06495 639 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CYP24A1Q07973 514 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 MAP7Q14244 749 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 LBRQ14739 615 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 KPNB1Q14974 876 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 MORF4L2Q15014 288 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 KIZQ2M2Z5 673 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TNFAIP8L3Q5GJ75 292 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ATF7IP2Q5U623 682 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 LRRC74BQ6ZQY2 392 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 RFX8Q6ZV50 586 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF677Q86XU0 584 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ZDHHC14Q8IZN3 488 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ST13P4Q8IZP2 240 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 VPS37AQ8NEZ2 397 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 EXD1Q8NHP7 514 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 RAET1EQ8TD07 263 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TAS1R2Q8TE23 839 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 SCG3Q8WXD2 468 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CD101Q93033 1021 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CYTH2Q99418 400 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 DENND2DQ9H6A0 471 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 AAASQ9NRG9 546 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 NDE1Q9NXR1 346 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 R3HDM2Q9Y2K5 976 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 LRRC42Q9Y546 428 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 IGKV6-21A0A0C4DH24 114 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 SPECC1L-ADORA2AF8WAN1 911 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ACKR2O00590 384 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 C2CD2LO14523 706 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TXNDC9O14530 226 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 B4GALT5O43286 388 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 RARBP10826 455 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CHRNB2P17787 502 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PSEN2P49810 448 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CACNA2D1P54289 1103 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 AP2B1P63010 937 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 NOP14P78316 857 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 THOC5Q13769 683 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 DAB2IPQ5VWQ8 1189 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CDCA2Q69YH5 1023 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ANO7Q6IWH7 933 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ZPBP2Q6X784 338 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 OTOAQ7RTW8 1153 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PRUNE1Q86TP1 453 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF398Q8TD17 642 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PLEKHO2Q8TD55 490 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ELMO3Q96BJ8 720 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 KREMEN1Q96MU8 473 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 KLF6Q99612 283 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PI4K2AQ9BTU6 479 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 METTL5Q9NRN9 209 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PARVAQ9NVD7 372 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 NMRK1Q9NWW6 199 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 NPTXRO95502 500 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 SMIM10L2AP0DMW4 78 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 SMIM10L2BP0DMW5 78 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 GNA15P30679 374 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CCNG1P51959 295 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 HADHQ16836 314 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 ZBTB41Q5SVQ8 909 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 C1orf146Q5VVC0 180 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM270Q6UE05 265 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 CXCL17Q6UXB2 119 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 C3orf62Q6ZUJ4 267 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 SV2AQ7L0J3 742 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TRIB2Q92519 343 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 USP6NLQ92738 828 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 TTC1Q99614 292 aa7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 MAK16Q9BXY0 300 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 PRMT7Q9NVM4 692 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-213ENST00000618999 LCTP09848 1927 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 COPEO14579 308 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 MYCP01106 439 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 LINGO3P0C6S8 592 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 UBTFL6P0CB48 400 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT10P13645 584 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ADRA1DP25100 572 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 SEC13P55735 322 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TMPRSS15P98073 1019 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TFAMQ00059 246 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 RHBDF2Q6PJF5 856 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 CATSPER4Q7RTX7 472 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 CLNKQ7Z7G1 428 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 CD99L2Q8TCZ2 262 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 SH3TC2Q8TF17 1288 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 KHSRPQ92945 711 aaKnown RBP eCLIP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 KATNAL1Q9BW62 490 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ZMYND8Q9ULU4 1186 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 NOD1Q9Y239 953 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 NRCAMQ92823 1304 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 A0A0B4J269 797 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms