RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 SCD5Q86SK9 330 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 CPNE8Q86YQ8 564 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 CDK5RAP1Q96SZ6 601 aaKnown RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 SMOC2Q9H3U7 446 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 USP18Q9UMW8 372 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 MIPP30301 263 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 DUSP4Q13115 394 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 MTA1Q13330 715 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 TTC9BQ8N6N2 239 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 MAIP1Q8WWC4 291 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 CFAP57Q96MR6 1250 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 UBE2OQ9C0C9 1292 aaKnown RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 OLA1Q9NTK5 396 aaKnown RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 RCOR3Q9P2K3 495 aaPredicted RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 DOCK4Q8N1I0 1966 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 NUP210Q8TEM1 1887 aaPredicted RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 PIK3R2O00459 728 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 SRGAP2O75044 1071 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 CSH1P0DML2 217 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 CSH2P0DML3 217 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 YWHAQP27348 245 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 PAFAH1B1P43034 410 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 MARCKSL1P49006 195 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 PDK2Q15119 407 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 DDR2Q16832 855 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 BSPRYQ5W0U4 402 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 KLHDC10Q6PID8 442 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 RSRC2Q7L4I2 434 aaKnown RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 TNS4Q8IZW8 715 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 MMGT1Q8N4V1 131 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 SCAMP5Q8TAC9 235 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 FAM172AQ8WUF8 416 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 FAF2Q96CS3 445 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 PRO3102Q9H379 93 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 CCDC188H7C350 402 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 PDE2AO00408 941 aaPredicted RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 ZNF185O15231 689 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 CNPP09543 421 aaKnown RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 PFKLP17858 780 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 IL1R2P27930 398 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 HOXA9P31269 272 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 CYP1B1Q16678 543 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 MGAT5BQ3V5L5 792 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 CCDC149Q6ZUS6 474 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 HFE2Q6ZVN8 426 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 SCN4BQ8IWT1 228 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 C12orf50Q8NA57 414 aaPredicted RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 PGLYRP2Q96PD5 576 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 SLITRK1Q96PX8 696 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 C17orf80Q9BSJ5 609 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 YIPF1Q9Y548 306 aa12.25□□□□□ -0.45
PDPN-211ENST00000617617 MKI67P46013 3256 aaKnown RBP12.25□□□□□ -0.45
PDPN-211ENST00000617617 SOBPA7XYQ1 873 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 TADA3O75528 432 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 CXCL14O95715 111 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 PYGMP11217 842 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 HMGA1P17096 107 aaKnown RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 RPL17P18621 184 aaKnown RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 DNAJB1P25685 340 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 CXCR3P49682 368 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 GPR15P49685 360 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 RABGGTBP53611 331 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 KLF1Q13351 362 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 DPYSL2Q16555 572 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 POF1BQ8WVV4 589 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 TSC1Q92574 1164 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 RUBCNQ92622 972 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 PEBP4Q96S96 227 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 FRMD8P1Q9BZ68 369 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 WDR6Q9NNW5 1121 aaKnown RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 TLR8Q9NR97 1041 aaKnown RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDPN-211ENST00000617617 INSL5Q9Y5Q6 135 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 CTAGE15A4D2H0 777 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ARHGEF15O94989 841 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ZRANB2O95218 330 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDPN-211ENST00000617617 CTAGE8P0CG41 777 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ERVFC1P60507 584 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 NRG1Q02297 640 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 CAMK1Q14012 370 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 C15orf59Q2T9L4 293 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 BRMS1LQ5PSV4 323 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 CTAGE6Q86UF2 777 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 SLC13A5Q86YT5 568 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 CTAGE4Q8IX94 777 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 SLC22A17Q8WUG5 538 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 PSMG2Q969U7 264 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 TCF25Q9BQ70 676 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 UXTQ9UBK9 157 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 SLC27A5Q9Y2P5 690 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 YBX2Q9Y2T7 364 aaKnown RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 NOTCH4Q99466 2003 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 FAM170AA1A519 330 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms