RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 MESP2Q0VG99 397 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 GAB4Q2WGN9 574 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 INTS6LQ5JSJ4 861 aaKnown RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 EMC10Q5UCC4 262 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 RESP18Q5W5W9 173 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 LMBRD2Q68DH5 695 aaPredicted RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 SHC4Q6S5L8 630 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 HS2ST1Q7LGA3 356 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 FILIP1Q7Z7B0 1213 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 OSTM1Q86WC4 334 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 CSGALNACT2Q8N6G5 542 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 PDILTQ8N807 584 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 OR2I1PQ8NGU4 316 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 TRMT2BQ96GJ1 504 aaKnown RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 PDLIM2Q96JY6 352 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 FAM84AQ96KN4 292 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 SMPD4Q9NXE4 827 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 EHD2Q9NZN4 543 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 ARHGAP26Q9UNA1 814 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 ATP6V1DQ9Y5K8 247 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 OBSL1O75147 1896 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 APC2O95996 2303 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 POLR2DO15514 142 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 OPHN1O60890 802 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 TACC1O75410 805 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 KAT7O95251 611 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ABL1P00519 1130 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 TNNC2P02585 160 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 APODP05090 189 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ITGB3P05106 788 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 KRT19P08727 400 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 TMEM191BP0C7N4 346 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 VDRP11473 427 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ATICP31939 592 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 MAGEA11P43364 429 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ME1P48163 572 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 PPP3CCP48454 512 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 PDE6CP51160 858 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 WNT7BP56706 349 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ZXDBP98169 803 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 RPL6Q02878 288 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 ENPEPQ07075 957 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SEMA3BQ13214 749 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 BYSLQ13895 437 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 DHCR24Q15392 516 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SNRNP35Q16560 246 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 MAP7D1Q3KQU3 841 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 EOGTQ5NDL2 527 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 FAM26FQ5R3K3 315 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SCARA3Q6AZY7 606 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SLC23A3Q6PIS1 610 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 VSTM1Q6UX27 236 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 C12orf40Q86WS4 652 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ADGRF2Q8IZF7 708 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 IL17RCQ8NAC3 791 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 XXYLT1Q8NBI6 393 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ACRBPQ8NEB7 543 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 NOC3LQ8WTT2 800 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 ERLEC1Q96DZ1 483 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 PNKPQ96T60 521 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 PKMYT1Q99640 499 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 CBWD1Q9BRT8 395 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 VRTNQ9H8Y1 702 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ARHGEF4Q9NR80 690 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 UTP6Q9NYH9 597 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 HSPBP1Q9NZL4 362 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 TRPM5Q9NZQ8 1165 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 TFIP11Q9UBB9 837 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 PILRBQ9UKJ0 227 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 PCDHA7Q9UN72 937 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SLC6A14Q9UN76 642 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ZKSCAN5Q9Y2L8 839 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 SNX9Q9Y5X1 595 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 MYO18AQ92614 2054 aaKnown RBP9.07□□□□□ -0.96
GPC6-202ENST00000617456 KIAA1549LQ6ZVL6 1849 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 ITPR1Q14643 2758 aa9.07□□□□□ -0.96
GPC6-202ENST00000617456 FLNBO75369 2602 aaKnown RBP9.06□□□□□ -0.96
GPC6-202ENST00000617456 WDFY3Q8IZQ1 3526 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 FAM237AA0A1B0GTK4 181 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 UPK3BL1B0FP48 263 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 UPK3BL2E5RIL1 263 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 H0Y626 953 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 TGFB1I1O43294 461 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 ATP2C2O75185 946 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 PRPF6O94906 941 aaKnown RBP9.06□□□□□ -0.96
GPC6-202ENST00000617456 TRIM16O95361 564 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CMA1P23946 247 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 HOXD13P35453 343 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 GRIK1P39086 918 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 WASP42768 502 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 RWDD2BP57060 319 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 ASIC1P78348 528 aa9.06□□□□□ -0.96
GPC6-202ENST00000617456 CLDN10P78369 228 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms