RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NSL1Q96IY1 281 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 GBP5Q96PP8 586 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 TMEM237Q96Q45 408 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 ELOVL4Q9GZR5 314 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 LHX5Q9H2C1 402 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARMCX1Q9P291 453 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 MROH7Q68CQ1 1323 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 MTSS1O43312 755 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ENO1P06733 434 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZNF286BP0CG31 522 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NCAM1P13591 858 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 AKAP5P24588 427 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PTPN4P29074 926 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADORA2AP29274 412 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RPA3P35244 121 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CDK16Q00536 496 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 OGDHQ02218 1023 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 FSTL1Q12841 308 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 MMRN1Q13201 1228 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 THOC5Q13769 683 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TCEAL1Q15170 157 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 MTHFD1LQ6UB35 978 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 C4orf22Q6V702 233 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 OTOAQ7RTW8 1153 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ABI1Q8IZP0 508 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PLD5Q8N7P1 536 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 SPDL1Q96EA4 605 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CPB2Q96IY4 423 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 C12orf65Q9H3J6 166 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 SCOCQ9UIL1 159 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NENFQ9UMX5 172 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ANKRD12Q6UB98 2062 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CNTNAP1P78357 1384 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RP1P56715 2156 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RASSF9O75901 435 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ASMTLO95671 621 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 FOXN2P32314 431 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 OASLQ15646 514 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ANKRD20A2Q5SQ80 823 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ANKRD20A1Q5TYW2 823 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ANKRD22Q5VYY1 191 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PIGWQ7Z7B1 504 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 UNC93AQ86WB7 457 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NT5DC4Q86YG4 428 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PPP1R13LQ8WUF5 828 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 DNAJC9Q8WXX5 260 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 VTA1Q9NP79 307 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RBPJLQ9UBG7 517 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ITGA11Q9UKX5 1188 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TIMM13Q9Y5L4 95 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 AP1G2O75843 785 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARIH2O95376 493 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CETPP11597 493 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CALB2P22676 271 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CYP2F1P24903 491 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 WNT7BP56706 349 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 HUNKP57058 714 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RPL10AP62906 217 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAP3K10Q02779 954 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 KLC1Q07866 573 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 BST2Q10589 180 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 BNIP1Q12981 228 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRPSAP1Q14558 356 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 C9orf131Q5VYM1 1079 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 HTR3CQ8WXA8 447 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NAF1Q96HR8 494 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 OSBPL1AQ9BXW6 950 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TSPYL2Q9H2G4 693 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NDE1Q9NXR1 346 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 FIS1Q9Y3D6 152 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NUMA1Q14980 2115 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NBASA2RRP1 2371 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 C2CD2LO14523 706 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TM9SF1O15321 606 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 AVILO75366 819 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 CD48P09326 243 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 MLH1P40692 756 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 ENPEPQ07075 957 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 MGAT5Q09328 741 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TARBP2Q15633 366 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 GRIK4Q16099 956 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAM182AQ5T1J6 154 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TAS1R3Q7RTX0 852 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TMEM192Q8IY95 271 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC26A7Q8TE54 656 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PPWD1Q96BP3 646 aaKnown RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 OPTNQ96CV9 577 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 LGMNQ99538 433 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 SPON2Q9BUD6 331 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 FBXO6Q9NRD1 293 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 DONSONQ9NYP3 566 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC39A10Q9ULF5 831 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRG3Q9Y2Y8 225 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 AFG3L2Q9Y4W6 797 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRPM3Q9HCF6 1732 aaPredicted RBP5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 E2F8A0AVK6 867 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 TCEA3O75764 348 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 GP5P40197 560 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 NOMO1Q15155 1222 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms