RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 FAM111AQ96PZ2 611 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 ADGRE3Q9BY15 652 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 SLCO1B7G3V0H7 640 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 PSMD10O75832 226 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 YY1P25490 414 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 STX5Q13190 355 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 TMEM132BQ14DG7 1078 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 TLR8Q9NR97 1041 aaKnown RBP9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 ITGALP20701 1170 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 SDE2Q6IQ49 451 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 TAGAPQ8N103 731 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 SERPINB11Q96P15 392 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 ELOVL4Q9GZR5 314 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 DMAP1Q9NPF5 467 aaPredicted RBP9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
SPTBN1-207ENST00000615901 CYP1A2P05177 515 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MGAT5Q09328 741 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 APOL5Q9BWW9 433 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TRHDEQ9UKU6 1024 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 PMPCBO75439 489 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TKTL1P51854 596 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 LRRC38Q5VT99 294 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MYCBPAPQ8TBZ2 947 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 UCMAQ8WVF2 138 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 RXFP2Q8WXD0 754 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 C17orf80Q9BSJ5 609 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CEP250Q9BV73 2442 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CCDC153Q494R4 210 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ACTL9Q8TC94 416 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 FAM162AQ96A26 154 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 WWOXQ9NZC7 414 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 DPP7Q9UHL4 492 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TSR3Q9UJK0 312 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 FAM32AQ9Y421 112 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MROH7Q68CQ1 1323 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TRIM66O15016 1216 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MPOP05164 745 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CCR1P32246 355 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ADIGQ0VDE8 80 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ORC1Q13415 861 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CAPRIN2Q6IMN6 1127 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TMC3Q7Z5M5 1100 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 PATL1Q86TB9 770 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MRPS31Q92665 395 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TRPM5Q9NZQ8 1165 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 SIK3Q9Y2K2 1263 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CITO14578 2027 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 OVOS1Q6IE37 1185 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CATSPERGQ6ZRH7 1159 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 VSIG10LQ86VR7 867 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 EME1Q96AY2 570 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MTMR8Q96EF0 704 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 P2RX7Q99572 595 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 A1CFQ9NQ94 594 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CHORDC1Q9UHD1 332 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 LGALS2P05162 132 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MBL2P11226 248 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 DNAJB2P25686 324 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CORO7P57737 925 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 IQSEC1Q6DN90 963 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 WNK4Q96J92 1243 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 OSMRQ99650 979 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 RNF112Q9ULX5 631 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 UBIAD1Q9Y5Z9 338 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 CDH17Q12864 832 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 LY6KQ17RY6 165 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 SEZ6Q53EL9 994 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 PKN3Q6P5Z2 889 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 LZTR1Q8N653 840 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 BLOC1S5Q8TDH9 187 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 TEKT4Q8WW24 435 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 DNAJC13O75165 2243 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ASTN1O14525 1302 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 ITGA9Q13797 1035 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 HIST2H2ACQ16777 129 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 HIST2H2AA3Q6FI13 130 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 UNC93AQ86WB7 457 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 GDF3Q9NR23 364 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 MYH7P12883 1935 aa9.41□□□□□ -0.9
SPTBN1-207ENST00000615901 GTF2BQ00403 316 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 SLC6A3Q01959 620 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 ZNF606Q8WXB4 792 aa9.4□□□□□ -0.9
SPTBN1-207ENST00000615901 HAS1Q92839 578 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms