RNA–Protein interactions for RNA: ENST00000614825.4

DDB2-208, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 3

Gene DDB2, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-208ENST00000614825 FAM92AA1XBS5 289 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 TBC1D3BA6NDS4 549 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 NEDD8-MDP1E9PL57 170 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 RALAP11233 206 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
DDB2-208ENST00000614825 KIF11P52732 1056 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 RAD23BP54727 409 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 STX17P56962 302 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 GOLGA7BQ2TAP0 167 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 RSRC2Q7L4I2 434 aaKnown RBP12.22□□□□□ -0.45
DDB2-208ENST00000614825 ERMP1Q7Z2K6 904 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 TTC39CQ8N584 583 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 ALLCQ8N6M5 410 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 SLC4A11Q8NBS3 891 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 TXNDC5Q8NBS9 432 aaKnown RBP12.22□□□□□ -0.45
DDB2-208ENST00000614825 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 OTUB2Q96DC9 234 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 ERLEC1Q96DZ1 483 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 DHTKD1Q96HY7 919 aaPredicted RBP12.22□□□□□ -0.45
DDB2-208ENST00000614825 KLF16Q9BXK1 252 aaPredicted RBP12.22□□□□□ -0.45
DDB2-208ENST00000614825 GTPBP4Q9BZE4 634 aaKnown RBP12.22□□□□□ -0.45
DDB2-208ENST00000614825 SPHK2Q9NRA0 654 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDB2-208ENST00000614825 RASAL2Q9UJF2 1139 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 DNMT3LQ9UJW3 386 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 MYO16Q9Y6X6 1858 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 ZNF292O60281 2723 aa12.22□□□□□ -0.45
DDB2-208ENST00000614825 PRR5-ARHGAP8B1AHC4 643 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.21□□□□□ -0.45
DDB2-208ENST00000614825 TULP3O75386 442 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 GRIA2P42262 883 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 YWHAEP62258 255 aaKnown RBP12.21□□□□□ -0.45
DDB2-208ENST00000614825 ARHGAP8P85298 464 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 EFEMP1Q12805 493 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 CUL2Q13617 745 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 COBLL1Q53SF7 1204 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 C10orf76Q5T2E6 689 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 PGBD3Q8N328 593 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 KIAA1958Q8N8K9 716 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 SPATA20Q8TB22 786 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 SLC35C1Q96A29 364 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 BBS2Q9BXC9 721 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 PNPLA8Q9NP80 782 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.45
DDB2-208ENST00000614825 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.21□□□□□ -0.45
DDB2-208ENST00000614825 DEC1Q9P2X7 70 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 HESX1Q9UBX0 185 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 MYOFQ9NZM1 2061 aa12.21□□□□□ -0.45
DDB2-208ENST00000614825 CCDC163A0A0D9SF12 145 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 DCDC2BA2VCK2 349 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 TRIM24O15164 1050 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 GDF9O60383 454 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 ALDH1A2O94788 518 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 TGM1P22735 817 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 WASP42768 502 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 PLA2G4AP47712 749 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 FMO5P49326 533 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 TKTL1P51854 596 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 MRPS21P82921 87 aaKnown RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 FOXK2Q01167 660 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 SF3A2Q15428 464 aaKnown RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 ELF2Q15723 593 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 CSRP2Q16527 193 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 AASDHQ4L235 1098 aaPredicted RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 USP39Q53GS9 565 aaKnown RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 SGO2Q562F6 1265 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 GRAMD4Q6IC98 578 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 PRR23CQ6ZRP0 262 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 NUDT18Q6ZVK8 323 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 CCDC186Q7Z3E2 898 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 SCD5Q86SK9 330 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 C12orf50Q8NA57 414 aaPredicted RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 UBA3Q8TBC4 463 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 HMGB4Q8WW32 186 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 NDRG1Q92597 394 aaKnown RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 XPO6Q96QU8 1125 aaKnown RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 SMOC1Q9H4F8 434 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 METTL14Q9HCE5 456 aaKnown RBP12.2□□□□□ -0.46
DDB2-208ENST00000614825 CYLDQ9NQC7 956 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 PLK2Q9NYY3 685 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 MMP17Q9ULZ9 603 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
DDB2-208ENST00000614825 BICDL2A1A5D9 508 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 SGK1O00141 431 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 TULP2O00295 520 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 HOXC11O43248 304 aaPredicted RBP12.19□□□□□ -0.46
DDB2-208ENST00000614825 TYRP14679 529 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 SDHBP21912 280 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
DDB2-208ENST00000614825 EIF2DP41214 584 aaKnown RBP12.19□□□□□ -0.46
DDB2-208ENST00000614825 PPP1R2P41236 205 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 TNFRSF4P43489 277 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 PSEN1P49768 467 aa12.19□□□□□ -0.46
DDB2-208ENST00000614825 ATXN1P54253 815 aaKnown RBP12.19□□□□□ -0.46
DDB2-208ENST00000614825 YWHAGP61981 247 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms