RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 COL4A3Q01955 1670 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 O00370 1275 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
CBWD3-208ENST00000612050 APODP05090 189 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 ACADSBP45954 432 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 GALK1P51570 392 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 ADIGQ0VDE8 80 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 CCINQ13939 588 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 KCNJ12Q14500 433 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 DHCR24Q15392 516 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 STX1AQ16623 288 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 ARHGAP44Q17R89 818 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 ANO4Q32M45 955 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 VWA3BQ502W6 1294 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 CCDC183Q5T5S1 534 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 TTC30AQ86WT1 665 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 MIB1Q86YT6 1006 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 ARHGEF19Q8IW93 802 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 LMO3Q8TAP4 145 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 KCTD13Q8WZ19 329 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 XPO6Q96QU8 1125 aaKnown RBP12.95□□□□□ -0.34
CBWD3-208ENST00000612050 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
CBWD3-208ENST00000612050 LINC00597Q9H2U6 94 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 NDST4Q9H3R1 872 aa12.95□□□□□ -0.34
CBWD3-208ENST00000612050 PRMT8Q9NR22 394 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-208ENST00000612050 RBM12Q9NTZ6 932 aaKnown RBP12.95□□□□□ -0.34
CBWD3-208ENST00000612050 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
CBWD3-208ENST00000612050 THAP12O43422 761 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 FBXO21O94952 628 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 CYBBP04839 570 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 CYP17A1P05093 508 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 LCP1P13796 627 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 BRD2P25440 801 aaKnown RBP12.94□□□□□ -0.34
CBWD3-208ENST00000612050 GNA15P30679 374 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 CHKAP35790 457 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 PTK2Q05397 1052 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 EFEMP1Q12805 493 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 FZD5Q13467 585 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 E2F5Q15329 346 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 RAB41Q5JT25 222 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 FKBP15Q5T1M5 1219 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 UBR7Q8N806 425 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 RIN3Q8TB24 985 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 HSFY1Q96LI6 401 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 NOX5Q96PH1 765 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 PNKPQ96T60 521 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 ULBP1Q9BZM6 244 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 PDCL3Q9H2J4 239 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 ABCC13Q9NSE7 274 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 NFE2L3Q9Y4A8 694 aa12.94□□□□□ -0.34
CBWD3-208ENST00000612050 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 ZBTB24O43167 697 aaPredicted RBP12.93□□□□□ -0.34
CBWD3-208ENST00000612050 RNF40O75150 1001 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
CBWD3-208ENST00000612050 EGFP01133 1207 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 PTMSP20962 102 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 CNR2P34972 360 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 HARS2P49590 506 aaKnown RBP12.93□□□□□ -0.34
CBWD3-208ENST00000612050 BPIFB4P59827 614 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 MEA1Q16626 185 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 PM20D1Q6GTS8 502 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 FSTL4Q6MZW2 842 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 ENOX1Q8TC92 643 aaKnown RBP12.93□□□□□ -0.34
CBWD3-208ENST00000612050 GPT2Q8TD30 523 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 IRGQQ8WZA9 623 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 CHFRQ96EP1 664 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
CBWD3-208ENST00000612050 NMUR1Q9HB89 426 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 SPHK2Q9NRA0 654 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 R4GN57 208 aa12.93□□□□□ -0.34
CBWD3-208ENST00000612050 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 OTOL1A6NHN0 477 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 SCAMP3O14828 347 aaKnown RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 TBX18O95935 607 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 SLC9A1P19634 815 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 ZXDBP98169 803 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 LY6G5CQ5SRR4 150 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 TSSK4Q6SA08 328 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 Q6ZS52 159 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 TRMT11Q7Z4G4 463 aaKnown RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 SCML4Q8N228 414 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 RPLP0P6Q8NHW5 317 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 KAT5Q92993 513 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 PLD4Q96BZ4 506 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms