RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 XYLT1Q86Y38 959 aa6.61□□□□□ -1.35
SNX13-213ENST00000611725 FITM2Q8N6M3 262 aa6.61□□□□□ -1.35
SNX13-213ENST00000611725 BCAP29Q9UHQ4 241 aa6.61□□□□□ -1.35
SNX13-213ENST00000611725 NCF2P19878 526 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 AMPD1P23109 780 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 EDNRBP24530 442 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 RPA3P35244 121 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 ASPAP45381 313 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 POU5F1BQ06416 359 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ITKQ08881 620 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 MPP2Q14168 576 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 NXNQ6DKJ4 435 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PIGWQ7Z7B1 504 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 SCN4BQ8IWT1 228 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CCNYL1Q8N7R7 359 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TTC16Q8NEE8 873 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 MAGEC3Q8TD91 643 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 SPOCK2Q92563 424 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 MCRS1Q96EZ8 462 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ATXN7L3BQ96GX2 97 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 LBHD1Q9BQE6 289 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 ZNF670Q9BS34 389 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CCDC134Q9H6E4 229 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CNTN6Q9UQ52 1028 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CASZ1Q86V15 1759 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ZNF189O75820 626 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 B3GAT3O94766 335 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TRUB2O95900 331 aaKnown RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 BGNP21810 368 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 IL1R2P27930 398 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 FDFT1P37268 417 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CPA2P48052 419 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ERFP50548 548 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 KPNA2P52292 529 aaKnown RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 THOC5Q13769 683 aaKnown RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 MAP7D1Q3KQU3 841 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 TDRPQ86YL5 185 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TMEM192Q8IY95 271 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PLD5Q8N7P1 536 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 XYLT2Q9H1B5 865 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CXorf56Q9H5V9 222 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PCDH18Q9HCL0 1135 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 COL16A1Q07092 1604 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 LTBP4Q8N2S1 1624 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ERBB2P04626 1255 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CD48P09326 243 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 NCAM1P13591 858 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 GDF10P55107 478 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 COG7P83436 770 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TSPY1Q01534 308 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CHI3L2Q15782 390 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 UGP2Q16851 508 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 RABGAP1LQ5R372 815 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 NPNTQ6UXI9 565 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 DENND5BQ6ZUT9 1274 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 FAM183BPQ6ZVS7 135 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ADGRF2Q8IZF7 708 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 HIPK4Q8NE63 616 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CMASQ8NFW8 434 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 ZC3H15Q8WU90 426 aaKnown RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 TTC1Q99614 292 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TXLNGYQ9BZA5 131 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PHACTR1Q9C0D0 580 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 SIX4Q9UIU6 781 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CCDC78A2IDD5 438 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 C2CD4BA6NLJ0 364 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 AP1G2O75843 785 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ASMTLO95671 621 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 LMNAP02545 664 aaKnown RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 PYGBP11216 843 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PTPN4P29074 926 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 GBE1Q04446 702 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PREPLQ4J6C6 727 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 TAF2Q6P1X5 1199 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 SLC26A9Q7LBE3 791 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 LONP2Q86WA8 852 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ANKRD52Q8NB46 1076 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 MCUQ8NE86 351 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 NLGN2Q8NFZ4 835 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 GSDMBQ8TAX9 411 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TFB1MQ8WVM0 346 aaKnown RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 FAXDC2Q96IV6 333 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 FAM167BQ9BTA0 163 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 B3GNT5Q9BYG0 378 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 PDZD7Q9H5P4 517 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 NUP98P52948 1817 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 IGKV6D-21A0A0A0MT36 114 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 SMIM28A0A1B0GU29 152 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 MYL2P10916 166 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 ALADP13716 330 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CLDN10P78369 228 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 CDCA2Q69YH5 1023 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 ECHDC2Q86YB7 292 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 NSL1Q96IY1 281 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 TSPYL2Q9H2G4 693 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
SNX13-213ENST00000611725 PGAP2Q9UHJ9 254 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms