RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 TLR8Q9NR97 1041 aaKnown RBP16.9■□□□□ 0.3
SGMS1-209ENST00000609445 NUDT5Q9UKK9 219 aa16.9■□□□□ 0.3
SGMS1-209ENST00000609445 SCML2Q9UQR0 700 aa16.9■□□□□ 0.3
SGMS1-209ENST00000609445 ATP6V1DQ9Y5K8 247 aa16.9■□□□□ 0.3
SGMS1-209ENST00000609445 LAMA1P25391 3075 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 A0A1W2PQH9 124 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 MDM4O15151 490 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 HOXC11O43248 304 aaPredicted RBP16.89■□□□□ 0.29
SGMS1-209ENST00000609445 GREM1O60565 184 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 TULP3O75386 442 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 PNOCQ13519 176 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 ANO4Q32M45 955 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 ZNF394Q53GI3 561 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 USP39Q53GS9 565 aaKnown RBP16.89■□□□□ 0.29
SGMS1-209ENST00000609445 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
SGMS1-209ENST00000609445 CNOT6LQ96LI5 555 aaKnown RBP16.89■□□□□ 0.29
SGMS1-209ENST00000609445 SPHK2Q9NRA0 654 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 VPS45Q9NRW7 570 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
SGMS1-209ENST00000609445 A0A0A0MRY4 1105 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 BCLAF3A2AJT9 711 aaKnown RBP16.88■□□□□ 0.29
SGMS1-209ENST00000609445 TBC1D3BA6NDS4 549 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-209ENST00000609445 ADAM23O75077 832 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 TRIM21P19474 475 aaKnown RBP16.88■□□□□ 0.29
SGMS1-209ENST00000609445 ATP5C1P36542 298 aaKnown RBP16.88■□□□□ 0.29
SGMS1-209ENST00000609445 TNFRSF4P43489 277 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 LIMK1P53667 647 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 STPG1Q5TH74 334 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 BTBD8Q5XKL5 378 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 PMS2CLQ68D20 193 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 IL31Q6EBC2 164 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 HTR3DQ70Z44 454 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 CYLDQ9NQC7 956 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 CACNA1BQ00975 2339 aa16.88■□□□□ 0.29
SGMS1-209ENST00000609445 MAP1BP46821 2468 aaKnown RBP16.88■□□□□ 0.29
SGMS1-209ENST00000609445 CAVIN2O95810 425 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 ADRB1P08588 477 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 RARGP13631 454 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 KIF11P52732 1056 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 ENPEPQ07075 957 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 KRT39Q6A163 491 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 SCD5Q86SK9 330 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 FRMD1Q8N878 549 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 CCDC150Q8NCX0 1101 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 OLIG1Q8TAK6 271 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 CNTNAP3BQ96NU0 1288 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 ARID3AQ99856 593 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 DUSP9Q99956 384 aaKnown RBP16.87■□□□□ 0.29
SGMS1-209ENST00000609445 DUSP16Q9BY84 665 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 CNTNAP3Q9BZ76 1288 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.87■□□□□ 0.29
SGMS1-209ENST00000609445 DEC1Q9P2X7 70 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 HCN2Q9UL51 889 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 CIZ1Q9ULV3 898 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-209ENST00000609445 PCDHA5Q9Y5H7 936 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 PLXND1Q9Y4D7 1925 aa16.87■□□□□ 0.29
SGMS1-209ENST00000609445 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 NEDD8-MDP1E9PL57 170 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 TM4SF5O14894 197 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 ALDH1A2O94788 518 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 GTF2H1P32780 548 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 PI4KAP42356 2102 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 WASP42768 502 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 PRCPP42785 496 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 MXI1P50539 228 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 MCCD1P59942 119 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 HSF5Q4G112 596 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 EOGTQ5NDL2 527 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 C10orf120Q5SQS8 335 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 TPGS1Q6ZTW0 290 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 MIB1Q86YT6 1006 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 FMR1NBQ8N0W7 255 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 ZNF513Q8N8E2 541 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 TERB1Q8NA31 727 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 HMGB4Q8WW32 186 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 ERCC4Q92889 916 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 TATDN2Q93075 761 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 HEXIM2Q96MH2 286 aaKnown RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 PNPLA8Q9NP80 782 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 CISHQ9NSE2 258 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 DNAJC17Q9NVM6 304 aaKnown RBP16.86■□□□□ 0.29
SGMS1-209ENST00000609445 NAGPAQ9UK23 515 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 CEP192Q8TEP8 1941 aa16.86■□□□□ 0.29
SGMS1-209ENST00000609445 TCRBV21S2A2A0A5A6 115 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 CETN3O15182 167 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
SGMS1-209ENST00000609445 P2RY2P41231 377 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 DHPSP49366 369 aaPredicted RBP16.85■□□□□ 0.29
SGMS1-209ENST00000609445 SLC4A11Q8NBS3 891 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 FBXL13Q8NEE6 735 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 ERLEC1Q96DZ1 483 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 P2RY11Q96G91 374 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 EDEM2Q9BV94 578 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 BBS2Q9BXC9 721 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 RAB20Q9NX57 234 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms