RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 CCDC14Q49A88 953 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 TPGS2Q68CL5 300 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 PM20D1Q6GTS8 502 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 HFE2Q6ZVN8 426 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 KATNAL2Q8IYT4 538 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 DEFB106AQ8N104 65 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 RASGEF1CQ8N431 466 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 ARFGAP1Q8N6T3 406 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 LRRN4CLQ8ND94 238 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 MYRIPQ8NFW9 859 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 FAM172AQ8WUF8 416 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 AUTS2Q8WXX7 1259 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 MS4A14Q96JA4 679 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 DDX23Q9BUQ8 820 aaKnown RBP12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 PLVAPQ9BX97 442 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 CRISPLD1Q9H336 500 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 POPDC2Q9HBU9 364 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 NGRNQ9NPE2 291 aaKnown RBP12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 SMARCAL1Q9NZC9 954 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 STAP1Q9ULZ2 295 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 SSX2IPQ9Y2D8 614 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 USP3Q9Y6I4 520 aa12.59□□□□□ -0.39
UBE2E3-214ENST00000602970 CAPN9O14815 690 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 TADA3O75528 432 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 SOAT2O75908 522 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 MIPP30301 263 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 CA8P35219 290 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 NOS2P35228 1153 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 DUSP4Q13115 394 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 RAB33AQ14088 237 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 SHHQ15465 462 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 ZNF572Q7Z3I7 529 aaPredicted RBP12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 NUP93Q8N1F7 819 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 RPGRIP1Q96KN7 1286 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 TBCBQ99426 244 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 C11orf84Q9BUA3 381 aaPredicted RBP12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 FBXO44Q9H4M3 255 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 RXFP1Q9HBX9 757 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 DDX56Q9NY93 547 aaKnown RBP12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 HSFX1Q9UBD0 423 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 LZTS1Q9Y250 596 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 SLC27A5Q9Y2P5 690 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 ATG2AQ2TAZ0 1938 aa12.58□□□□□ -0.4
UBE2E3-214ENST00000602970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 GRXCR1A8MXD5 290 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 LILRB3O75022 631 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 ABLIM3O94929 683 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 KRT7P08729 469 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 PYGMP11217 842 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 TFE3P19532 575 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 IL1R2P27930 398 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 TUFMP49411 452 aaKnown RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 YWHAGP61981 247 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 CLUL1Q15846 466 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 SLC25A52Q3SY17 297 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 DCAF6Q58WW2 860 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 ZFYVE27Q5T4F4 411 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 SH3PXD2AQ5TCZ1 1133 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 TXNRD3NBQ6F5E7 133 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 DENND5BQ6ZUT9 1274 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 STRADAQ7RTN6 431 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 CCDC50Q8IVM0 306 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 TNS4Q8IZW8 715 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 EXD1Q8NHP7 514 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 ZNF461Q8TAF7 563 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 RBM41Q96IZ5 413 aaKnown RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 CEP295NLQ96MC4 621 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 NAP1L3Q99457 506 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 NPY6RQ99463 290 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 C17orf80Q9BSJ5 609 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 ENTPD7Q9NQZ7 604 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 KLHL11Q9NVR0 708 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 RRN3Q9NYV6 651 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 PCSK1NQ9UHG2 260 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 TTC7AQ9ULT0 858 aaPredicted RBP12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 USP18Q9UMW8 372 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 NAALADL1Q9UQQ1 740 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 SCML2Q9UQR0 700 aa12.57□□□□□ -0.4
UBE2E3-214ENST00000602970 YIPF1Q9Y548 306 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms