RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 ARMCX6Q7L4S7 300 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 ZC3H3Q8IXZ2 948 aaKnown RBP14.53□□□□□ -0.08
IRF3-225ENST00000600022 TMEFF1Q8IYR6 380 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 DEFB119Q8N690 84 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 NAT16Q8N8M0 369 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 OR6B3Q8NGW1 331 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 SCAMP5Q8TAC9 235 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 OLIG1Q8TAK6 271 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 PLEKHO2Q8TD55 490 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 PIGKQ92643 395 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 CCDC127Q96BQ5 260 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 ERLEC1Q96DZ1 483 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 CNOT6LQ96LI5 555 aaKnown RBP14.53□□□□□ -0.08
IRF3-225ENST00000600022 C8orf48Q96LL4 319 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 DUSP9Q99956 384 aaKnown RBP14.53□□□□□ -0.08
IRF3-225ENST00000600022 THAP9Q9H5L6 903 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 IFNKQ9P0W0 207 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 NUP205Q92621 2012 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 PTPRDP23468 1912 aa14.53□□□□□ -0.08
IRF3-225ENST00000600022 KHNYNO15037 678 aaKnown RBP14.52□□□□□ -0.09
IRF3-225ENST00000600022 KIR2DL1P43626 348 aaPredicted RBP14.52□□□□□ -0.09
IRF3-225ENST00000600022 CASP4P49662 377 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 CYP2J2P51589 502 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 MYL6P60660 151 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 NOP14P78316 857 aaKnown RBP14.52□□□□□ -0.09
IRF3-225ENST00000600022 KDSRQ06136 332 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 FOXC1Q12948 553 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 UAP1L1Q3KQV9 507 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 WDR72Q3MJ13 1102 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 PAQR9Q6ZVX9 377 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 WDR49Q8IV35 697 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 NELFCDQ8IXH7 590 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 ZFRQ96KR1 1074 aaKnown RBP14.52□□□□□ -0.09
IRF3-225ENST00000600022 PNKPQ96T60 521 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 SNX25Q9H3E2 840 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 TRAF3IP3Q9Y228 551 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 DSPP15924 2871 aaKnown RBP14.52□□□□□ -0.09
IRF3-225ENST00000600022 ZFYVE26Q68DK2 2539 aa14.52□□□□□ -0.09
IRF3-225ENST00000600022 NBEAQ8NFP9 2946 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 PDXKO00764 312 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 COCHO43405 550 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 NRDCO43847 1150 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 KAT7O95251 611 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 PROS1P07225 676 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 TNNI1P19237 187 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 EEF1GP26641 437 aaKnown RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 ANXA13P27216 316 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 ZNF252P-AS1Q0IIN9 211 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 SNRNP35Q16560 246 aaKnown RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 NFIL3Q16649 462 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 LY6G5CQ5SRR4 150 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 ANKRD40Q6AI12 368 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 CYP2U1Q7Z449 544 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 MIB1Q86YT6 1006 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 PHTF2Q8N3S3 785 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 SPC24Q8NBT2 197 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 DEFB124Q8NES8 71 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 GOLGA5Q8TBA6 731 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 EXOC4Q96A65 974 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 XPO4Q9C0E2 1151 aaKnown RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 SDCBP2Q9H190 292 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 XYLT2Q9H1B5 865 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 CCSER2Q9H7U1 834 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 AGPAT3Q9NRZ7 376 aa14.51□□□□□ -0.09
IRF3-225ENST00000600022 NXF1Q9UBU9 619 aaKnown RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 R3HCC1Q9Y3T6 440 aaKnown RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 HELZP42694 1942 aaKnown RBP14.51□□□□□ -0.09
IRF3-225ENST00000600022 ATXN2Q99700 1313 aaKnown RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 FREM2Q5SZK8 3169 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 A0A0A0MRY4 1105 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 TRIM66O15016 1216 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 AP5Z1O43299 807 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 TACC1O75410 805 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 MBL2P11226 248 aaPredicted RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 P2RY2P41231 377 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 WASP42768 502 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 MRPS21P82921 87 aaKnown RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 CYP24A1Q07973 514 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 MAPRE1Q15691 268 aaKnown RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 MAP7D1Q3KQU3 841 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 TDRD10Q5VZ19 366 aaKnown RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 TMEM25Q86YD3 366 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 CREBRFQ8IUR6 639 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 TMEM174Q8WUU8 243 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 HMGB4Q8WW32 186 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 SMYD3Q9H7B4 428 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 TMEM9BQ9NQ34 198 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 ARHGEF4Q9NR80 690 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 SAMSN1Q9NSI8 373 aaKnown RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 IMPACTQ9P2X3 320 aa14.5□□□□□ -0.09
IRF3-225ENST00000600022 ASCC3Q8N3C0 2202 aaKnown RBP14.5□□□□□ -0.09
IRF3-225ENST00000600022 CACNA1EQ15878 2313 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 A8MXQ7 604 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 KCNJ18B7U540 433 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 TNFRSF10BO14763 440 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 KIAA0391O15091 583 aaKnown RBP14.49□□□□□ -0.09
IRF3-225ENST00000600022 CALUO43852 315 aaPredicted RBP14.49□□□□□ -0.09
IRF3-225ENST00000600022 BEST1O76090 585 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 ATP1A3P13637 1013 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms