RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CHFRQ96EP1 664 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 KIF9Q9HAQ2 790 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 GTSE1Q9NYZ3 720 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 CFAP97Q9P2B7 532 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 DAAM1Q9Y4D1 1078 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 OBSL1O75147 1896 aa14.91□□□□□ -0.02
SHKBP1-217ENST00000598558 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 CD72P21854 359 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 ATP5C1P36542 298 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 CDR2Q01850 454 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 EFEMP1Q12805 493 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 ARHGAP29Q52LW3 1261 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 C2CD6Q53TS8 623 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 C10orf120Q5SQS8 335 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 CACNA2D4Q7Z3S7 1137 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 YAF2Q8IY57 180 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 CPA5Q8WXQ8 436 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 PPP1R13BQ96KQ4 1090 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 SYT11Q9BT88 431 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 LRFN3Q9BTN0 628 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 EBF3Q9H4W6 596 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 TRPV5Q9NQA5 729 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 FBXL21Q9UKT6 434 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 MTF2Q9Y483 593 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 TRIOO75962 3097 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 TECTAO75443 2155 aa14.9□□□□□ -0.02
SHKBP1-217ENST00000598558 PI15O43692 258 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 KLKB1P03952 638 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 CYP1A1P04798 512 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 IRF1P10914 325 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 ACADSBP45954 432 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 PSEN1P49768 467 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 PDE6CP51160 858 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 NOMO3P69849 1222 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 EML3Q32P44 896 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 SYPL2Q5VXT5 272 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 NAA35Q5VZE5 725 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 BTBD8Q5XKL5 378 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 NAIF1Q69YI7 327 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 KLHDC10Q6PID8 442 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 MIB1Q86YT6 1006 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 OSCP1Q8WVF1 389 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 IRGQQ8WZA9 623 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 IRF7Q92985 503 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 P2RY11Q96G91 374 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 SFMBT1Q9UHJ3 866 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 DNMT3LQ9UJW3 386 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 NAALADL1Q9UQQ1 740 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 ANAPC1Q9H1A4 1944 aa14.89□□□□□ -0.03
SHKBP1-217ENST00000598558 DENND4CQ5VZ89 1909 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 ZNF638Q14966 1978 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 FBXO21O94952 628 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 LTFP02788 710 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 HMBSP08397 361 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 RALAP11233 206 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 PITX1P78337 314 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 MLF2Q15773 248 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 GAB4Q2WGN9 574 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 FIGNQ5HY92 759 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 CWF19L1Q69YN2 538 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 TXNDC11Q6PKC3 985 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 FAM183BPQ6ZVS7 135 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 BMP8AQ7Z5Y6 402 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 ADGRG2Q8IZP9 1017 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 ZNF687Q8N1G0 1237 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 ARHGAP18Q8N392 663 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 TMEM35BQ8NCS4 154 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 SLC30A5Q8TAD4 765 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 CPLX3Q8WVH0 158 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 DNASE1L2Q92874 299 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 PBXIP1Q96AQ6 731 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 AGPAT1Q99943 283 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 DDX23Q9BUQ8 820 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 EDEM3Q9BZQ6 932 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 FOXQ1Q9C009 403 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 THG1LQ9NWX6 298 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 DUS2Q9NX74 493 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 AIPL1Q9NZN9 384 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 RASAL2Q9UJF2 1139 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 MYO6Q9UM54 1294 aa14.88□□□□□ -0.03
SHKBP1-217ENST00000598558 SLC12A8A0AV02 714 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 GRAP2O75791 330 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 STC2O76061 302 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 GYPCP04921 128 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 SKILP12757 684 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 UNGP13051 313 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 GABRB2P47870 512 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 STARD6P59095 220 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 PFKPQ01813 784 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 PTP4A2Q12974 167 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 FZD5Q13467 585 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 RUNX3Q13761 415 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 TMEM31Q5JXX7 168 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 OR6B2Q6IFH4 312 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 OLFML1Q6UWY5 402 aa14.87□□□□□ -0.03
SHKBP1-217ENST00000598558 TPRG1Q6ZUI0 275 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms