RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 DNAJC6O75061 913 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 KRT16P08779 473 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 KCNA2P16389 499 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 PTK2BQ14289 1009 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 LINC00523Q86TU6 105 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 USP33Q8TEY7 942 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 NAT9Q9BTE0 207 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 ILKAPQ9H0C8 392 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.14□□□□□ -0.315e-6■■■□□ 17.4
DNMT1-228ENST00000592705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 SDR42E2A6NKP2 422 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 SEZ6Q53EL9 994 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 GLRA4Q5JXX5 417 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 NAF1Q96HR8 494 aaKnown RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 DPP3Q9NY33 737 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 H0Y626 953 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 EPHB6O15197 1021 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 PARNO95453 639 aaKnown RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 FAXCQ5TGI0 409 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 ANGPTL8Q6UXH0 198 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CNPY3Q9BT09 278 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CISHQ9NSE2 258 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 GEMIN8Q9NWZ8 242 aaKnown RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF197O14709 1029 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 ESRRBO95718 433 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 MYBL2P10244 700 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CKBP12277 381 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 PRKCQQ04759 706 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
DNMT1-228ENST00000592705 FLOT2Q14254 428 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 KDELC2Q7Z4H8 507 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 IL1RAPL1Q9NZN1 696 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 USP18Q9UMW8 372 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 NCANO14594 1321 aa13.14□□□□□ -0.31
DNMT1-228ENST00000592705 CFAP99D6REC4 459 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 FBXW4P57775 412 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CBWD6Q4V339 395 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CBWD3Q5JTY5 395 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CBWD5Q5RIA9 395 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 IRAK1BP1Q5VVH5 260 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CEP68Q76N32 757 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 YIPF2Q9BWQ6 316 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 REXO2Q9Y3B8 237 aaKnown RBP13.13□□□□□ -0.31
DNMT1-228ENST00000592705 TLR2O60603 784 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 RALBP11234 206 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 FGRP09769 529 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 THRAP10827 490 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 SERPINB8P50452 374 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 RASA2Q15283 850 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 ATP6V0D2Q8N8Y2 350 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CIPCQ9C0C6 399 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 ZMYND8Q9ULU4 1186 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-228ENST00000592705 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CYP3A7P24462 503 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 ACTL9Q8TC94 416 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 HAS1Q92839 578 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 CYP3A43Q9HB55 503 aa13.13□□□□□ -0.31
DNMT1-228ENST00000592705 AKT1P31749 480 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 REPS2Q8NFH8 660 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-228ENST00000592705 CCDC78A2IDD5 438 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 TMEM247A6NEH6 219 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 EML1O00423 815 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 GRK2P25098 689 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 RANBP1P43487 201 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 AQP5P55064 265 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-228ENST00000592705 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
DNMT1-228ENST00000592705 KBTBD12Q3ZCT8 623 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 RGL4Q8IZJ4 473 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 GLIS3Q8NEA6 775 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 ATXN3LQ9H3M9 355 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 GID8Q9NWU2 228 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 PCYOX1Q9UHG3 505 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms