RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 MYLPFQ96A32 169 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 OTUB2Q96DC9 234 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 C8orf48Q96LL4 319 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 SLC22A12Q96S37 553 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 PNKPQ96T60 521 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TTLL2Q9BWV7 592 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 ELOVL4Q9GZR5 314 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 LINC00597Q9H2U6 94 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 TMEM9BQ9NQ34 198 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 SCHIP1Q9P0W5 487 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-226ENST00000591534 SIX4Q9UIU6 781 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 MMP17Q9ULZ9 603 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 ZDHHC9Q9Y397 364 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 HRH3Q9Y5N1 445 aa10.03□□□□□ -0.8
BRCA1-226ENST00000591534 DNMT3AQ9Y6K1 912 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-226ENST00000591534 CACNA1BQ00975 2339 aa10.02□□□□□ -0.8
BRCA1-226ENST00000591534 ZNF840PA6NDX5 716 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 C4orf47A7E2U8 309 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 EIF3DO15371 548 aaKnown RBP eCLIP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 TACC1O75410 805 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 CEACAM1P13688 526 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 LMO2P25791 158 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 RDXP35241 583 aaKnown RBP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 GRIA2P42262 883 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 TNFRSF4P43489 277 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 CASP5P51878 434 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 PSMC1P62191 440 aaKnown RBP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 CENPCQ03188 943 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 CRY1Q16526 586 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 KLHL40Q2TBA0 621 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 PMS2CLQ68D20 193 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 ANO7Q6IWH7 933 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 TRAPPC11Q7Z392 1133 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 LIMS2Q7Z4I7 341 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 FILIP1Q7Z7B0 1213 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 OSTM1Q86WC4 334 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 RASSF3Q86WH2 238 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 TTC30AQ86WT1 665 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 ADGRG2Q8IZP9 1017 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 PDILTQ8N807 584 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 RIN3Q8TB24 985 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 OVCA2Q8WZ82 227 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 PCED1BQ96HM7 432 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 FGFBP2Q9BYJ0 223 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 SLC32A1Q9H598 525 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 RXFP3Q9NSD7 469 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 HSPBP1Q9NZL4 362 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 BCCIPQ9P287 314 aaKnown RBP eCLIP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 CGNQ9P2M7 1197 aaKnown RBP10.02□□□□□ -0.81
BRCA1-226ENST00000591534 RCOR1Q9UKL0 485 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 CPQQ9Y646 472 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 SPTBN2O15020 2390 aa10.02□□□□□ -0.81
BRCA1-226ENST00000591534 A0A1W2PQ27 194 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 A0A1W2PQ64 194 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 A0A1W2PQD8 194 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 E2F8A0AVK6 867 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 A8MXQ7 604 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 F8VP50 259 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 K7EQS6 105 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 DCLK1O15075 740 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 SPTLC2O15270 562 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 PHACTR2O75167 634 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 ATP2C2O75185 946 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 CLSTN1O94985 981 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 KAT7O95251 611 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 DLATP10515 647 aaKnown RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 MBL2P11226 248 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 PTPN1P18031 435 aaKnown RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 CSRP1P21291 193 aaKnown RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 YWHAQP27348 245 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 ATICP31939 592 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 ME1P48163 572 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 DHPSP49366 369 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 AP3M2P53677 418 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 DNM1Q05193 864 aaKnown RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 GAD2Q05329 585 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 TAF10Q12962 218 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 DHCR24Q15392 516 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 WDR72Q3MJ13 1102 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 MDH1BQ5I0G3 518 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 SHC4Q6S5L8 630 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 RABEPKQ7Z6M1 372 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 CBWD2Q8IUF1 395 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 NUP93Q8N1F7 819 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 ZSWIM2Q8NEG5 633 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 OR5B17Q8NGF7 314 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 GOLGA5Q8TBA6 731 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 KBTBD7Q8WVZ9 684 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 TNIP3Q96KP6 325 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 GTPBP4Q9BZE4 634 aaKnown RBP10.01□□□□□ -0.81
BRCA1-226ENST00000591534 TPSD1Q9BZJ3 242 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 DNAI2Q9GZS0 605 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 NACA2Q9H009 215 aa10.01□□□□□ -0.81
BRCA1-226ENST00000591534 SAP130Q9H0E3 1048 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms