RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.88■■□□□ 1.73
RFX1-205ENST00000589239 SLC2A13Q96QE2 648 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 GMIPQ9P107 970 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 TRIOBPQ9H2D6 2365 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 SPOPO43791 374 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 NCAM1P13591 858 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 H2AFXP16104 143 aaPredicted RBP25.88■■□□□ 1.73
RFX1-205ENST00000589239 HMGA1P17096 107 aaKnown RBP25.88■■□□□ 1.73
RFX1-205ENST00000589239 TFE3P19532 575 aaPredicted RBP25.88■■□□□ 1.73
RFX1-205ENST00000589239 MATKP42679 507 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 DNA2P51530 1060 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 YWHAGP61981 247 aaKnown RBP eCLIP25.88■■□□□ 1.73
RFX1-205ENST00000589239 ATP11AP98196 1134 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 VEPH1Q14D04 833 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 LRIT3Q3SXY7 679 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 MEI1Q5TIA1 1274 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 CCDC149Q6ZUS6 474 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 GOLGA1Q92805 767 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 ADAM33Q9BZ11 813 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 ZNF576Q9H609 170 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 MAN1C1Q9NR34 630 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 AMFRQ9UKV5 643 aa25.88■■□□□ 1.73
RFX1-205ENST00000589239 A0A1W2PQH9 124 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 CAPN9O14815 690 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 CSH1P0DML2 217 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 CSH2P0DML3 217 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 EPHB3P54753 998 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 MON1AQ86VX9 555 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 NIPA2Q8N8Q9 360 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 NAPGQ99747 312 aaPredicted RBP25.87■■□□□ 1.73
RFX1-205ENST00000589239 CNPY3Q9BT09 278 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 DDX23Q9BUQ8 820 aaKnown RBP25.87■■□□□ 1.73
RFX1-205ENST00000589239 TTLL2Q9BWV7 592 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 TLR10Q9BXR5 811 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 L2HGDHQ9H9P8 463 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 ZNF446Q9NWS9 450 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 OSER1Q9NX31 292 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 GREB1Q4ZG55 1949 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 CTAGE9A4FU28 777 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 RAB6CQ53S08 254 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 DNAJB7Q7Z6W7 309 aaPredicted RBP25.87■■□□□ 1.73
RFX1-205ENST00000589239 ARFGAP1Q8N6T3 406 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 RAB6CQ9H0N0 254 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 COMMD8Q9NX08 183 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 HCFC2Q9Y5Z7 792 aa25.87■■□□□ 1.73
RFX1-205ENST00000589239 DPYSL4O14531 572 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 LRG1P02750 347 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 MAN1A1P33908 653 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 NOS2P35228 1153 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 SLC1A1P43005 524 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 PITX1P78337 314 aaPredicted RBP25.86■■□□□ 1.73
RFX1-205ENST00000589239 TAF12Q16514 161 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 PSMG2Q969U7 264 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 TLE6Q9H808 572 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 LCMT1Q9UIC8 334 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 MYO16Q9Y6X6 1858 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 ATG2AQ2TAZ0 1938 aa25.86■■□□□ 1.73
RFX1-205ENST00000589239 TCF4P15884 667 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 PLD1Q13393 1074 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 SLC22A17Q8WUG5 538 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 SLITRK1Q96PX8 696 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 ZNF638Q14966 1978 aaKnown RBP25.85■■□□□ 1.73
RFX1-205ENST00000589239 A0A1W2PPC1 479 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 LRCH4O75427 683 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 SSR1P43307 286 aaKnown RBP25.85■■□□□ 1.73
RFX1-205ENST00000589239 NRIP1P48552 1158 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 BTBD8Q5XKL5 378 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 CC2D1AQ6P1N0 951 aaPredicted RBP25.85■■□□□ 1.73
RFX1-205ENST00000589239 FAM172AQ8WUF8 416 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 MRPL38Q96DV4 380 aaKnown RBP25.85■■□□□ 1.73
RFX1-205ENST00000589239 TBCBQ99426 244 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 ABCC13Q9NSE7 274 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 REV3LO60673 3130 aa25.85■■□□□ 1.73
RFX1-205ENST00000589239 COL4A4P53420 1690 aaPredicted RBP25.85■■□□□ 1.73
RFX1-205ENST00000589239 RFPL2O75678 378 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 PTPN9P43378 593 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 SLC25A52Q3SY17 297 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 CD101Q93033 1021 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 MYRFLQ96LU7 910 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 PSMB7Q99436 277 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 PLEKHA4Q9H4M7 779 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 NUDT5Q9UKK9 219 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 SULT1E1P49888 294 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 TAS2R40P59535 323 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 PPM1LQ5SGD2 360 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 ADAM32Q8TC27 787 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 KRT35Q92764 455 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 NT5C3BQ969T7 300 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 HES6Q96HZ4 224 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 TLR8Q9NR97 1041 aaKnown RBP25.84■■□□□ 1.73
RFX1-205ENST00000589239 EHD2Q9NZN4 543 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 STAP1Q9ULZ2 295 aa25.84■■□□□ 1.73
RFX1-205ENST00000589239 RNF8O76064 485 aa25.83■■□□□ 1.73
RFX1-205ENST00000589239 MARCKSL1P49006 195 aa25.83■■□□□ 1.73
RFX1-205ENST00000589239 ATXN1P54253 815 aaKnown RBP25.83■■□□□ 1.73
RFX1-205ENST00000589239 RPS6KA1Q15418 735 aa25.83■■□□□ 1.73
RFX1-205ENST00000589239 DUSP6Q16828 381 aa25.83■■□□□ 1.73
RFX1-205ENST00000589239 OTUD1Q5VV17 481 aaPredicted RBP25.83■■□□□ 1.73
RFX1-205ENST00000589239 ZNF512Q96ME7 567 aaPredicted RBP25.83■■□□□ 1.73
RFX1-205ENST00000589239 NPY6RQ99463 290 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms