RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 NENFQ9UMX5 172 aa16.21■□□□□ 0.19
RPRD1A-208ENST00000589050 C2orf16Q68DN1 1984 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 SOBPA7XYQ1 873 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 COCHO43405 550 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 TLR5O60602 858 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 HSF2BPO75031 334 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 PTMAP06454 111 aaKnown RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 GLI1P08151 1106 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 RRM1P23921 792 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 SCNN1AP37088 669 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 GSCP56915 257 aaPredicted RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 YWHAZP63104 245 aaKnown RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 C10orf120Q5SQS8 335 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 POTEHQ6S545 545 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 TADA2BQ86TJ2 420 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 CMTM8Q8IZV2 173 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 ARL14EPQ8N8R7 260 aaPredicted RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 ATXN2LQ8WWM7 1075 aaKnown RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 ZNF653Q96CK0 615 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 ACSF2Q96CM8 615 aaPredicted RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 SLC22A12Q96S37 553 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 CYP2S1Q96SQ9 504 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 CDK5RAP1Q96SZ6 601 aaKnown RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 TRIM62Q9BVG3 475 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 POPDC2Q9HBU9 364 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 METTL5Q9NRN9 209 aaKnown RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 NUDT5Q9UKK9 219 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 USTQ9Y2C2 406 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 NR2E1Q9Y466 385 aa16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 ZFP37Q9Y6Q3 630 aaPredicted RBP16.2■□□□□ 0.18
RPRD1A-208ENST00000589050 CAPN9O14815 690 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 ATMINO43313 823 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 TBX18O95935 607 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 FYNP06241 537 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 CKMP06732 381 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 MYBL1P10243 752 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 LAMP2P13473 410 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 NCAM1P13591 858 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 PFKLP17858 780 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 HDCP19113 662 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 ABCB4P21439 1286 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 AVPR1AP37288 418 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 RNASE9P60153 205 aaKnown RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 MTF1Q14872 753 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 RAD9BQ6WBX8 426 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 LRRC8AQ8IWT6 810 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 ZNF276Q8N554 614 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 TDRD5Q8NAT2 981 aaKnown RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 C3orf20Q8ND61 904 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 ZSCAN18Q8TBC5 510 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 RPGRIP1Q96KN7 1286 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 SELENOOQ9BVL4 669 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 RNF38Q9H0F5 515 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 OLA1Q9NTK5 396 aaKnown RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 NAALADL1Q9UQQ1 740 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 EPN1Q9Y6I3 576 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 GREB1Q4ZG55 1949 aa16.19■□□□□ 0.18
RPRD1A-208ENST00000589050 MYH10P35580 1976 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 C2CD4DB7Z1M9 353 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 ZNF263O14978 683 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 MDM4O15151 490 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 DAB1O75553 588 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 NDUFA10O95299 355 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 GJB6O95452 261 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 OLFM2O95897 454 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 MBL2P11226 248 aaPredicted RBP16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 KRT3P12035 628 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 ATP5C1P36542 298 aaKnown RBP16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 GALCP54803 685 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 SPA17Q15506 151 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 FAM78AQ5JUQ0 283 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 BEND5Q7L4P6 421 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 DEFB106AQ8N104 65 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 CCDC112Q8NEF3 446 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 SMARCD2Q92925 531 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 KHSRPQ92945 711 aaKnown RBP eCLIP16.18■□□□□ 0.184e-7■■■■□ 25
RPRD1A-208ENST00000589050 ASB16Q96NS5 453 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 SLC2A13Q96QE2 648 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 THAP2Q9H0W7 228 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 SMG9Q9H0W8 520 aaKnown RBP16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 EPS15L1Q9UBC2 864 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 MYO1AQ9UBC5 1043 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 RASAL2Q9UJF2 1139 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 DNMT3LQ9UJW3 386 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 TMEM59LQ9UK28 342 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 EYSQ5T1H1 3165 aa16.18■□□□□ 0.18
RPRD1A-208ENST00000589050 MYO16Q9Y6X6 1858 aa16.17■□□□□ 0.18
RPRD1A-208ENST00000589050 TCRBV5S1A1TA0A578 114 aa16.17■□□□□ 0.18
RPRD1A-208ENST00000589050 ANKRD62A6NC57 917 aa16.17■□□□□ 0.18
RPRD1A-208ENST00000589050 EIF3CLB5ME19 914 aaKnown RBP16.17■□□□□ 0.18
RPRD1A-208ENST00000589050 NRDCO43847 1150 aa16.17■□□□□ 0.18
RPRD1A-208ENST00000589050 ABCB7O75027 752 aa16.17■□□□□ 0.18
RPRD1A-208ENST00000589050 IPO7O95373 1038 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms