RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 MEA1Q16626 185 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 USP41Q3LFD5 358 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 CTXN3Q4LDR2 81 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 SGO2Q562F6 1265 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 MDH1BQ5I0G3 518 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 HGSNATQ68CP4 663 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 FAM109BQ6ICB4 259 aaPredicted RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 WDR59Q6PJI9 974 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 CD300LGQ6UXG3 332 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 ANKS3Q6ZW76 656 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 IRF2BP2Q7Z5L9 587 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 NOP9Q86U38 636 aaKnown RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 ZNF677Q86XU0 584 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 PASD1Q8IV76 773 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 TDHQ8IZJ6 230 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 SLC20A1Q8WUM9 679 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 BCL7CQ8WUZ0 217 aaPredicted RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 TWNKQ96RR1 684 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 CHP1Q99653 195 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 AGPAT1Q99943 283 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 ACBD6Q9BR61 282 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 MED10Q9BTT4 135 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 TTPALQ9BTX7 342 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 HERC2P3Q9BVR0 1158 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 GPR62Q9BZJ7 368 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 DPEP3Q9H4B8 488 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 NHEJ1Q9H9Q4 299 aaPredicted RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 ACP6Q9NPH0 428 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 LUC7LQ9NQ29 371 aaKnown RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 FAM49BQ9NUQ9 324 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 ARHGAP20Q9P2F6 1191 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 HESX1Q9UBX0 185 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 STK39Q9UEW8 545 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 NOCTQ9UK39 431 aaKnown RBP5.62□□□□□ -1.51
LIG3-210ENST00000588109 CDH9Q9ULB4 789 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 KIAA1257Q9ULG3 409 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 CNTN6Q9UQ52 1028 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 CEP83Q9Y592 693 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 TSC2P49815 1807 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 KIAA1671Q9BY89 1806 aa5.62□□□□□ -1.51
LIG3-210ENST00000588109 SSU72P8A0A1W2PR75 194 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 FAM170AA1A519 330 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 OR6C75A6NL08 312 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 TMCO5BA8MYB1 307 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 F8W735 103 aaPredicted RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 M0QYV0 167 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 GABRDO14764 452 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 GIPC1O14908 333 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 ATP8B3O60423 1300 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 LPXNO60711 386 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 ATP2C2O75185 946 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 ALX3O95076 343 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 OAZ2O95190 189 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 NDUFA10O95299 355 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 PROCP04070 461 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 MMEP08473 750 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 CCDC130P13994 396 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 ANXA13P27216 316 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 ADORA2BP29275 332 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 NOS3P29474 1203 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 BMP8BP34820 402 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 BMPR1AP36894 532 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 KIF11P52732 1056 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 SLC8A3P57103 927 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 CCZ1BP86790 482 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 CCZ1P86791 482 aaPredicted RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 GFPT1Q06210 699 aaPredicted RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 GRM2Q14416 872 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 MTF1Q14872 753 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 STILQ15468 1287 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 MAPRE1Q15691 268 aaKnown RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 PSMD5Q16401 504 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 GOLGA7BQ2TAP0 167 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 RTP2Q5QGT7 225 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 PRSS55Q6UWB4 352 aaPredicted RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 TRIM72Q6ZMU5 477 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 C4orf50Q6ZRC1 276 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 TAS1R1Q7RTX1 841 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 ZNF571Q7Z3V5 609 aaPredicted RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 LIMS2Q7Z4I7 341 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 KIAA1328Q86T90 577 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 DDX53Q86TM3 631 aaKnown RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 SPATA2LQ8IUW3 424 aaPredicted RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 CCDC170Q8IYT3 715 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 DCP1BQ8IZD4 617 aaKnown RBP5.61□□□□□ -1.51
LIG3-210ENST00000588109 VPS52Q8N1B4 723 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 CRYBG2Q8N1P7 616 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 C12orf29Q8N999 325 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 SLC4A11Q8NBS3 891 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 B3GALNT2Q8NCR0 500 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 OR10T2Q8NGX3 314 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 MYCBPAPQ8TBZ2 947 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 SLC2A14Q8TDB8 520 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 MICAL1Q8TDZ2 1067 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 ZNF606Q8WXB4 792 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 TFAP2BQ92481 460 aa5.61□□□□□ -1.51
LIG3-210ENST00000588109 TP53INP1Q96A56 240 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms