RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 DHTKD1Q96HY7 919 aaPredicted RBP11.85□□□□□ -0.51
ACTN4-209ENST00000586538 ZFRQ96KR1 1074 aaKnown RBP11.85□□□□□ -0.51
ACTN4-209ENST00000586538 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 DCLK3Q9C098 648 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 APOBEC3GQ9HC16 384 aaKnown RBP11.85□□□□□ -0.51
ACTN4-209ENST00000586538 VPS45Q9NRW7 570 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 CISHQ9NSE2 258 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 OLA1Q9NTK5 396 aaKnown RBP11.85□□□□□ -0.51
ACTN4-209ENST00000586538 NAGPAQ9UK23 515 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 STRIP2Q9ULQ0 834 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 KIAA1549LQ6ZVL6 1849 aa11.85□□□□□ -0.51
ACTN4-209ENST00000586538 K7EQS6 105 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 SLC30A4O14863 429 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 BEST1O76090 585 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 IRF1P10914 325 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 RARGP13631 454 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 TGM1P22735 817 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 PXNP49023 591 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 KIF11P52732 1056 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 LIMK1P53667 647 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 BCAT1P54687 386 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 SRSF5Q13243 272 aaKnown RBP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 PLK5Q496M5 336 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 SGO2Q562F6 1265 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 C10orf120Q5SQS8 335 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 PPP1R26Q5T8A7 1209 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 ARHGAP17Q68EM7 881 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 GRAMD4Q6IC98 578 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 RASSF3Q86WH2 238 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 BBS7Q8IWZ6 715 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 ZC3H3Q8IXZ2 948 aaKnown RBP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 SMYD4Q8IYR2 804 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 TERB1Q8NA31 727 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 JAKMIP2Q96AA8 810 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 TWNKQ96RR1 684 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 ARRDC1-AS1Q9H2J1 176 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 C2orf42Q9NWW7 574 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 MARK1Q9P0L2 795 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 BCCIPQ9P287 314 aaKnown RBP eCLIP11.84□□□□□ -0.51
ACTN4-209ENST00000586538 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 COQ4Q9Y3A0 265 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 SPAG17Q6Q759 2223 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 GPR179Q6PRD1 2367 aa11.84□□□□□ -0.51
ACTN4-209ENST00000586538 RALGAPA1Q6GYQ0 2036 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 HHLA1C9JL84 531 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 NPC1O15118 1278 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 P4HA2O15460 535 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 CYP26A1O43174 497 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 CACNG3O60359 315 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 KLF8O95600 359 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 FGFR1OPO95684 399 aaKnown RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 GNA14O95837 355 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 CYBBP04839 570 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 TIE1P35590 1138 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 MPLP40238 635 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ATXN1P54253 815 aaKnown RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ZNF445P59923 1031 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 KDSRQ06136 332 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 CUL2Q13617 745 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 STILQ15468 1287 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 GAB4Q2WGN9 574 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 SPDYCQ5MJ68 293 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ANO7Q6IWH7 933 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 RSRC2Q7L4I2 434 aaKnown RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 KBTBD6Q86V97 674 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ETFBKMTQ8IXQ9 262 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ZNF513Q8N8E2 541 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ANKRD52Q8NB46 1076 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 TXNDC5Q8NBS9 432 aaKnown RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ENGASEQ8NFI3 743 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 EZH1Q92800 747 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 BBS2Q9BXC9 721 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 KLF16Q9BXK1 252 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.83□□□□□ -0.52
ACTN4-209ENST00000586538 USP3Q9Y6I4 520 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 FRYLO94915 3013 aa11.83□□□□□ -0.52
ACTN4-209ENST00000586538 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 A0A1W2PQH9 124 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 XPO1O14980 1071 aaKnown RBP11.82□□□□□ -0.52
ACTN4-209ENST00000586538 PMM2O15305 246 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 TULP3O75386 442 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 SETSIPP0DME0 302 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 VDRP11473 427 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 BST2Q10589 180 aaKnown RBP11.82□□□□□ -0.52
ACTN4-209ENST00000586538 C10orf76Q5T2E6 689 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 PMS2CLQ68D20 193 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 NAIF1Q69YI7 327 aaPredicted RBP11.82□□□□□ -0.52
ACTN4-209ENST00000586538 ANKRD40Q6AI12 368 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 ALLCQ8N6M5 410 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 IL17RCQ8NAC3 791 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 SLC4A11Q8NBS3 891 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 UCMAQ8WVF2 138 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms