RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-222	ENST00000582050	RARS2	Q5T160	578 aa	Known RBP	18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	CES5A	Q6NT32	575 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	FNIP1	Q8TF40	1166 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	SLC2A13	Q96QE2	648 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	LACRT	Q9GZZ8	138 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	NMUR1	Q9HB89	426 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	TMEM51	Q9NW97	253 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RRN3	Q9NYV6	651 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ZMYM5	Q9UJ78	669 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	PYCARD	Q9ULZ3	195 aa		18.79	■□□□□ 0.6
EIF4A1-222	ENST00000582050	CLUH	O75153	1309 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	GOLGA6L9	A6NEM1	432 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	TBX10	O75333	385 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	GRAP2	O75791	330 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MYL4	P12829	197 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	DDX6	P26196	483 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	NOS2	P35228	1153 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RFC1	P35251	1148 aa	Predicted RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	DEK	P35659	375 aa	Known RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	LTBR	P36941	435 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MATK	P42679	507 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RNASE9	P60153	205 aa	Known RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	TAF5	Q15542	800 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	IFI16	Q16666	785 aa	Known RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ARHGAP29	Q52LW3	1261 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ATAT1	Q5SQI0	421 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	EP400NL	Q6ZTU2	488 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	HFE2	Q6ZVN8	426 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	GAREM2	Q75VX8	874 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	TMEM150A	Q86TG1	271 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	HS6ST3	Q8IZP7	471 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RNF10	Q8N5U6	811 aa	Known RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ZNF564	Q8TBZ8	553 aa	Predicted RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MRPS31	Q92665	395 aa	Known RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MSLNL	Q96KJ4	702 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MCEE	Q96PE7	176 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ATXN3L	Q9H3M9	355 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	KCND1	Q9NSA2	647 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	OLA1	Q9NTK5	396 aa	Known RBP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	HCFC1R1	Q9NWW0	138 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	STAP1	Q9ULZ2	295 aa		18.78	■□□□□ 0.6
EIF4A1-222	ENST00000582050	C2CD4B	A6NLJ0	364 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	MYO1F	O00160	1098 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ABL1	P00519	1130 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	FYN	P06241	537 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	NCAM1	P13591	858 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RARG	P13631	454 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	PDGFRA	P16234	1089 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	DES	P17661	470 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	SDC4	P31431	198 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	FLT3	P36888	993 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	ARHGAP25	P42331	645 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	NOP2	P46087	812 aa	Known RBP	18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RPL7A	P62424	266 aa	Known RBP	18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	DCAF6	Q58WW2	860 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	PRSS36	Q5K4E3	855 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	HECTD3	Q5T447	861 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	KLHDC10	Q6PID8	442 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RSRC2	Q7L4I2	434 aa	Known RBP	18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	DEFB106A	Q8N104	65 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	JOSD2	Q8TAC2	188 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RNF139	Q8WU17	664 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	RIPOR3	Q96MK2	946 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	DDX23	Q9BUQ8	820 aa	Known RBP	18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	S1PR5	Q9H228	398 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	TFR2	Q9UP52	801 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050	REV3L	O60673	3130 aa		18.77	■□□□□ 0.6
EIF4A1-222	ENST00000582050		A0A1W2PRU2	124 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	TADA3	O75528	432 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	GPD1	P21695	349 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	PTPN9	P43378	593 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	PGF	P49763	221 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	ZNF143	P52747	638 aa	Predicted RBP	18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	DLX2	Q07687	328 aa	Predicted RBP	18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	ACAP1	Q15027	740 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	ARHGAP15	Q53QZ3	475 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	MSANTD2	Q6P1R3	559 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	CCAR2	Q8N163	923 aa	Known RBP	18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	EMC1	Q8N766	993 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	KIAA1524	Q8TCG1	905 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	RXFP2	Q8WXD0	754 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	EDEM1	Q92611	657 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	NT5C3B	Q969T7	300 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	WDR6	Q9NNW5	1121 aa	Known RBP	18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	OSGEP	Q9NPF4	335 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	OSER1	Q9NX31	292 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	IP6K2	Q9UHH9	426 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	ANAPC7	Q9UJX3	599 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	COG5	Q9UP83	839 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	NAALADL1	Q9UQQ1	740 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	ZKSCAN5	Q9Y2L8	839 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	MRPS23	Q9Y3D9	190 aa	Known RBP	18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	DUSP10	Q9Y6W6	482 aa		18.76	■□□□□ 0.59
EIF4A1-222	ENST00000582050	DENND4C	Q5VZ89	1909 aa		18.75	■□□□□ 0.59
EIF4A1-222	ENST00000582050	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.75	■□□□□ 0.59
EIF4A1-222	ENST00000582050	DPYSL4	O14531	572 aa		18.75	■□□□□ 0.59
EIF4A1-222	ENST00000582050	TLR5	O60602	858 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms