RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 OSER1Q9NX31 292 aa12.72□□□□□ -0.37
IFT20-207ENST00000578547 NUDT5Q9UKK9 219 aa12.72□□□□□ -0.37
IFT20-207ENST00000578547 MRPS23Q9Y3D9 190 aaKnown RBP12.72□□□□□ -0.37
IFT20-207ENST00000578547 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
IFT20-207ENST00000578547 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 ZNF197O14709 1029 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 DAB1O75553 588 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 F11P03951 625 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 TMEM253P0C7T8 217 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 RALAP11233 206 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 KRT3P12035 628 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 NCAM1P13591 858 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 RARGP13631 454 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 CEBPBP17676 345 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 FSHRP23945 695 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 MTHFRP42898 656 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 EPHA5P54756 1037 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 YWHAZP63104 245 aaKnown RBP12.71□□□□□ -0.37
IFT20-207ENST00000578547 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
IFT20-207ENST00000578547 ARHGAP15Q53QZ3 475 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 STXBP5Q5T5C0 1151 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 DCUN1D2Q6PH85 259 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 SLC26A9Q7LBE3 791 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 EMC1Q8N766 993 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 ITFG1Q8TB96 612 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 RNF139Q8WU17 664 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 NACA2Q9H009 215 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 POPDC2Q9HBU9 364 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
IFT20-207ENST00000578547 AVENQ9NQS1 362 aaPredicted RBP12.71□□□□□ -0.37
IFT20-207ENST00000578547 PARVAQ9NVD7 372 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 CTTNBP2NLQ9P2B4 639 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
IFT20-207ENST00000578547 SCINQ9Y6U3 715 aa12.71□□□□□ -0.37
IFT20-207ENST00000578547 OBSL1O75147 1896 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 C2orf78A6NCI8 922 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 MDM4O15151 490 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 TLR5O60602 858 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 MOSPD3O75425 235 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 CYP1A2P05177 515 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 CCDC175P0C221 793 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 ZDHHC11BP0C7U3 371 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 FLT3P36888 993 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 SCNN1AP37088 669 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 PPP3CCP48454 512 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 PSEN1P49768 467 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 VAV2P52735 878 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 GSCP56915 257 aaPredicted RBP12.7□□□□□ -0.38
IFT20-207ENST00000578547 MAMLD1Q13495 774 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 CBX2Q14781 532 aaPredicted RBP12.7□□□□□ -0.38
IFT20-207ENST00000578547 DCAF6Q58WW2 860 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 PRSS36Q5K4E3 855 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 C10orf120Q5SQS8 335 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 HECTD3Q5T447 861 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 GPR158Q5T848 1215 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 TXNDC8Q6A555 127 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 PLEKHA7Q6IQ23 1121 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
IFT20-207ENST00000578547 DEFB106AQ8N104 65 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 TTC16Q8NEE8 873 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 NUP85Q9BW27 656 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 POMKQ9H5K3 350 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 MRPL47Q9HD33 250 aaKnown RBP12.7□□□□□ -0.38
IFT20-207ENST00000578547 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 ASNSD1Q9NWL6 643 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.7□□□□□ -0.38
IFT20-207ENST00000578547 THEGQ9P2T0 379 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 INTUQ9ULD6 942 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 NAALADL1Q9UQQ1 740 aa12.7□□□□□ -0.38
IFT20-207ENST00000578547 SPTBN5Q9NRC6 3674 aaKnown RBP12.7□□□□□ -0.38
IFT20-207ENST00000578547 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 SYNJ2BP-COX16A0A087WUM0 186 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 A0A0U1RQJ8 604 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 TCRBV5S1A1TA0A578 114 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 TBX18O95935 607 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 FYNP06241 537 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 GLI1P08151 1106 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 SP100P23497 879 aaPredicted RBP12.69□□□□□ -0.38
IFT20-207ENST00000578547 RFC1P35251 1148 aaPredicted RBP12.69□□□□□ -0.38
IFT20-207ENST00000578547 KCNQ1P51787 676 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 RPL7AP62424 266 aaKnown RBP12.69□□□□□ -0.38
IFT20-207ENST00000578547 EFEMP1Q12805 493 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 SYPL2Q5VXT5 272 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 TRNP1Q6NT89 227 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 POTEHQ6S545 545 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 MIB1Q86YT6 1006 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 TXLNBQ8N3L3 684 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 ARL14EPQ8N8R7 260 aaPredicted RBP12.69□□□□□ -0.38
IFT20-207ENST00000578547 MAB21L3Q8N8X9 362 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 ADAM32Q8TC27 787 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 RXFP2Q8WXD0 754 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms