RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 PDE6CP51160 858 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 CLDN10P78369 228 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 CLEC20AQ6ZU45 233 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 SLC41A1Q8IVJ1 513 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 ZNF513Q8N8E2 541 aaPredicted RBP12.73□□□□□ -0.37
PRPF8-215ENST00000576958 WHAMMQ8TF30 809 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 DDX1Q92499 740 aaKnown RBP12.73□□□□□ -0.37
PRPF8-215ENST00000576958 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
PRPF8-215ENST00000576958 KLF16Q9BXK1 252 aaPredicted RBP12.73□□□□□ -0.37
PRPF8-215ENST00000576958 MMRN2Q9H8L6 949 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 SPHK2Q9NRA0 654 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
PRPF8-215ENST00000576958 DMXL2Q8TDJ6 3036 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 HOXC11O43248 304 aaPredicted RBP12.72□□□□□ -0.37
PRPF8-215ENST00000576958 MAP3K13O43283 966 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 TLR5O60602 858 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 RTN3O95197 1032 aaPredicted RBP12.72□□□□□ -0.37
PRPF8-215ENST00000576958 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 NR3C1P04150 777 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 PFKLP17858 780 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 CD58P19256 250 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 NDUFV2P19404 249 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 ATICP31939 592 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 PPP3CCP48454 512 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 AMPD3Q01432 767 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 GAD2Q05329 585 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 PPP3CAQ08209 521 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 ZACNQ401N2 412 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 SNX30Q5VWJ9 437 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 SCD5Q86SK9 330 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 TERB1Q8NA31 727 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 EEF2KMTQ96G04 330 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 SMARCD1Q96GM5 515 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 CEP295NLQ96MC4 621 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
PRPF8-215ENST00000576958 CACNA2D2Q9NY47 1150 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 CLEC4EQ9ULY5 219 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 CYP8B1Q9UNU6 501 aa12.72□□□□□ -0.37
PRPF8-215ENST00000576958 FREM2Q5SZK8 3169 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 SLC9A3R1O14745 358 aaPredicted RBP12.71□□□□□ -0.37
PRPF8-215ENST00000576958 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.37
PRPF8-215ENST00000576958 KLKB1P03952 638 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 CFIP05156 583 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 HMBSP08397 361 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 HOXB2P14652 356 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 TYRP14679 529 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 PFKFB1P16118 471 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 MAOBP27338 520 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 EIF2DP41214 584 aaKnown RBP12.71□□□□□ -0.37
PRPF8-215ENST00000576958 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 GCLMP48507 274 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 EOGTQ5NDL2 527 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 UNQ6494/PRO21346Q6UXR6 183 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 LPCAT2Q7L5N7 544 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 TAS1R2Q8TE23 839 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
PRPF8-215ENST00000576958 SEMA4DQ92854 862 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 EXOC4Q96A65 974 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 CAMK1GQ96NX5 476 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 SCNM1Q9BWG6 230 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 GTPBP2Q9BX10 602 aaKnown RBP12.71□□□□□ -0.37
PRPF8-215ENST00000576958 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 POLMQ9NP87 494 aaPredicted RBP12.71□□□□□ -0.37
PRPF8-215ENST00000576958 DEC1Q9P2X7 70 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 PILRBQ9UKJ0 227 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 ZDHHC9Q9Y397 364 aa12.71□□□□□ -0.37
PRPF8-215ENST00000576958 LAMA5O15230 3695 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 CACNA1GO43497 2377 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 ALDH1A2O94788 518 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
PRPF8-215ENST00000576958 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 CISD3P0C7P0 127 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 ACO1P21399 889 aaKnown RBP12.7□□□□□ -0.38
PRPF8-215ENST00000576958 PIK3CAP42336 1068 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 RPL6Q02878 288 aaKnown RBP12.7□□□□□ -0.38
PRPF8-215ENST00000576958 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 OVCA2Q8WZ82 227 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 ARID3AQ99856 593 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 BBS2Q9BXC9 721 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 NACA2Q9H009 215 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 GOLPH3LQ9H4A5 285 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 FAM13BQ9NYF5 915 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 TBC1D14Q9P2M4 693 aa12.7□□□□□ -0.38
PRPF8-215ENST00000576958 KLK13Q9UKR3 277 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms