RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 COG7P83436 770 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 APBA1Q02410 837 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 PTK2Q05397 1052 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 TCF15Q12870 199 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 LRRC32Q14392 662 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 C10orf120Q5SQS8 335 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 FKBP15Q5T1M5 1219 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 TRIM68Q6AZZ1 485 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 HTR3DQ70Z44 454 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 FAM71AQ8IYT1 594 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 SIX6OS1Q8N1H7 587 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 NAA15Q9BXJ9 866 aaKnown RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 STK33Q9BYT3 514 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 ULBP1Q9BZM6 244 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 VPS16Q9H269 839 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 OLA1Q9NTK5 396 aaKnown RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 TAB2Q9NYJ8 693 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 SH3BP1Q9Y3L3 701 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 WNT6Q9Y6F9 365 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 FOXN3O00409 490 aaPredicted RBP14.25□□□□□ -0.13
CIITA-210ENST00000575513 SART1O43290 800 aaKnown RBP14.25□□□□□ -0.13
CIITA-210ENST00000575513 CHRNB1P11230 501 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 UCHL3P15374 230 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 GJA4P35212 333 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 USP8P40818 1118 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 SOX9P48436 509 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 COPB1P53618 953 aaKnown RBP14.25□□□□□ -0.13
CIITA-210ENST00000575513 ADIGQ0VDE8 80 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 TMEM196Q5HYL7 178 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 C1orf210Q8IVY1 113 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 AOPEPQ8N6M6 819 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 SLC4A5Q9BY07 1137 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 LHX5Q9H2C1 402 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 HSD3B7Q9H2F3 369 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 CHRDQ9H2X0 955 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 LMAN1LQ9HAT1 526 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 ABCC13Q9NSE7 274 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 RAPGEFL1Q9UHV5 662 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 NDRG2Q9UN36 371 aaKnown RBP14.25□□□□□ -0.13
CIITA-210ENST00000575513 PCDHGC3Q9UN70 934 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 ZNF510Q9Y2H8 683 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 PATJQ8NI35 1801 aa14.25□□□□□ -0.13
CIITA-210ENST00000575513 COL4A2P08572 1712 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 CACNA1HO95180 2353 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 LGALS16A8MUM7 142 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 THAP12O43422 761 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 GREM1O60565 184 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 GABBR2O75899 941 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 CLCN1P35523 988 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 DAOAP59103 153 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 GRSF1Q12849 480 aaKnown RBP eCLIP14.24□□□□□ -0.13
CIITA-210ENST00000575513 CCINQ13939 588 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 DRAP1Q14919 205 aaPredicted RBP14.24□□□□□ -0.13
CIITA-210ENST00000575513 IQCB1Q15051 598 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 BSPRYQ5W0U4 402 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 BTBD8Q5XKL5 378 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 TXNDC11Q6PKC3 985 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 BHLHA9Q7RTU4 235 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 APTXQ7Z2E3 356 aaKnown RBP14.24□□□□□ -0.13
CIITA-210ENST00000575513 TMEM110Q86TL2 294 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 DHX40Q8IX18 779 aaKnown RBP14.24□□□□□ -0.13
CIITA-210ENST00000575513 TTC16Q8NEE8 873 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 TTC8Q8TAM2 541 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 CHFRQ96EP1 664 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 LSM7Q9UK45 103 aaKnown RBP14.24□□□□□ -0.13
CIITA-210ENST00000575513 WDFY4Q6ZS81 3184 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 KMT2EQ8IZD2 1858 aa14.24□□□□□ -0.13
CIITA-210ENST00000575513 KIF26AQ9ULI4 1882 aaPredicted RBP14.24□□□□□ -0.13
CIITA-210ENST00000575513 YJEFN3A6XGL0 299 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 E7ENQ6 273 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 ADH1CP00326 375 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 CALCAP01258 141 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 LCP1P13796 627 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 DRD1P21728 446 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 EIF2DP41214 584 aaKnown RBP14.23□□□□□ -0.13
CIITA-210ENST00000575513 SNX16P57768 344 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 PON2Q15165 354 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 ANGPT1Q15389 498 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 DHCR24Q15392 516 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 FBXO43Q4G163 708 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 RHBDF2Q6PJF5 856 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 BEND5Q7L4P6 421 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 CCDC26Q8TAB7 109 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 ERGIC2Q96RQ1 377 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 P2RY13Q9BPV8 354 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 TRIM62Q9BVG3 475 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 LSM14BQ9BX40 385 aaKnown RBP14.23□□□□□ -0.13
CIITA-210ENST00000575513 DCLK3Q9C098 648 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 ACP6Q9NPH0 428 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 MARCH2Q9P0N8 246 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 AJAP1Q9UKB5 411 aaPredicted RBP14.23□□□□□ -0.13
CIITA-210ENST00000575513 FBXO4Q9UKT5 387 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 STRIP2Q9ULQ0 834 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 SIK3Q9Y2K2 1263 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 FHOD1Q9Y613 1164 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 MYH10P35580 1976 aa14.23□□□□□ -0.13
CIITA-210ENST00000575513 CYP17A1P05093 508 aa14.22□□□□□ -0.13
CIITA-210ENST00000575513 KRT9P35527 623 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms