RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 BSPRYQ5W0U4 402 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 TXNDC8Q6A555 127 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 HFE2Q6ZVN8 426 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 GET4Q7L5D6 327 aaPredicted RBP19.06■□□□□ 0.64
CCDC40-213ENST00000574933 ING5Q8WYH8 240 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 PIWIL1Q96J94 861 aaKnown RBP19.06■□□□□ 0.64
CCDC40-213ENST00000574933 TRIM62Q9BVG3 475 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 DEF6Q9H4E7 631 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 TRPV4Q9HBA0 871 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 ABCC13Q9NSE7 274 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 PRKAG3Q9UGI9 489 aa19.06■□□□□ 0.64
CCDC40-213ENST00000574933 C2orf78A6NCI8 922 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 TLR5O60602 858 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 HSF2BPO75031 334 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 FYNP06241 537 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 RALAP11233 206 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 LAMP2P13473 410 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 RARGP13631 454 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 IL9P15248 144 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 YWHAZP63104 245 aaKnown RBP19.05■□□□□ 0.64
CCDC40-213ENST00000574933 MSANTD2Q6P1R3 559 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 TRIM11Q96F44 468 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 ZSWIM3Q96MP5 696 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 SLC2A13Q96QE2 648 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 BAG1Q99933 345 aaPredicted RBP19.05■□□□□ 0.64
CCDC40-213ENST00000574933 TMEM59LQ9UK28 342 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 NR2E1Q9Y466 385 aa19.05■□□□□ 0.64
CCDC40-213ENST00000574933 TRAV19A0A0A6YYK7 116 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 MYBL1P10243 752 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 TCF3P15923 654 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 KCNQ1P51787 676 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 SLC7A9P82251 487 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 GFPT1Q06210 699 aaPredicted RBP19.04■□□□□ 0.64
CCDC40-213ENST00000574933 C2CD6Q53TS8 623 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 CCDC122Q5T0U0 273 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 BTBD8Q5XKL5 378 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 PLEKHA7Q6IQ23 1121 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 TADA2BQ86TJ2 420 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 ZDHHC14Q8IZN3 488 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 CMTM8Q8IZV2 173 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 PLCD3Q8N3E9 789 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 MAB21L3Q8N8X9 362 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 C3orf20Q8ND61 904 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 GOLGA1Q92805 767 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 ACSF2Q96CM8 615 aaPredicted RBP19.04■□□□□ 0.64
CCDC40-213ENST00000574933 ASB16Q96NS5 453 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 SLC22A12Q96S37 553 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 RNF38Q9H0F5 515 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 CCSER2Q9H7U1 834 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 POPDC2Q9HBU9 364 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 OLA1Q9NTK5 396 aaKnown RBP19.04■□□□□ 0.64
CCDC40-213ENST00000574933 XIRP2A4UGR9 3374 aa19.04■□□□□ 0.64
CCDC40-213ENST00000574933 ANKRD62A6NC57 917 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 TMCO5BA8MYB1 307 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 ZNF263O14978 683 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 COCHO43405 550 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 DAB1O75553 588 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 BMP1P13497 986 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 HDCP19113 662 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 GBP2P32456 591 aaPredicted RBP19.03■□□□□ 0.64
CCDC40-213ENST00000574933 CYLC1P35663 651 aaPredicted RBP19.03■□□□□ 0.64
CCDC40-213ENST00000574933 TAF5Q15542 800 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 PPP1R15BQ5SWA1 713 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 C10orf76Q5T2E6 689 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 ARL14EPQ8N8R7 260 aaPredicted RBP19.03■□□□□ 0.64
CCDC40-213ENST00000574933 CCDC112Q8NEF3 446 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 SMARCD2Q92925 531 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 FAM149B1Q96BN6 582 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 ASB2Q96Q27 587 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 OBP2AQ9NY56 170 aa19.03■□□□□ 0.64
CCDC40-213ENST00000574933 MYOFQ9NZM1 2061 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 SIGLEC16A6NMB1 481 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 EIF3CLB5ME19 914 aaKnown RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 C2CD4DB7Z1M9 353 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 LOC730098B7Z3J9 87 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 ABL1P00519 1130 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 RRM1P23921 792 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 ATP5C1P36542 298 aaKnown RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 FAM78AQ5JUQ0 283 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 FAM102AQ5T9C2 384 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 ARID3BQ8IVW6 561 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 LRRC8AQ8IWT6 810 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 ADHFE1Q8IWW8 467 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 KIAA1958Q8N8K9 716 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 TDRD5Q8NAT2 981 aaKnown RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 ZSCAN18Q8TBC5 510 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 CYP2S1Q96SQ9 504 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 EIF3CQ99613 913 aaKnown RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 SLITRK6Q9H5Y7 841 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 SPTLC3Q9NUV7 552 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 DNMT3LQ9UJW3 386 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 INTUQ9ULD6 942 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 ARHGAP26Q9UNA1 814 aa19.02■□□□□ 0.64
CCDC40-213ENST00000574933 EPN1Q9Y6I3 576 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-213ENST00000574933 SOWAHDA6NJG2 315 aa19.01■□□□□ 0.63
CCDC40-213ENST00000574933 C19orf67A6NJJ6 358 aa19.01■□□□□ 0.63
CCDC40-213ENST00000574933 ANHXE9PGG2 379 aa19.01■□□□□ 0.63
CCDC40-213ENST00000574933 NDUFA10O95299 355 aa19.01■□□□□ 0.63
CCDC40-213ENST00000574933 FCARP24071 287 aa19.01■□□□□ 0.63
CCDC40-213ENST00000574933 NOS2P35228 1153 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms