RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 FRYLO94915 3013 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 K7ESF4 209 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 LEFTY2O00292 366 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 AP1G2O75843 785 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
LITAF-216ENST00000574848 CCDC130P13994 396 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 FECHP22830 423 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 YWHAQP27348 245 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 GJA4P35212 333 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 KRT9P35527 623 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 CXCL12P48061 93 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 IFNAR2P48551 515 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 MXI1P50539 228 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 NRLP54845 237 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 SATB1Q01826 763 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 FSTL4Q6MZW2 842 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 TSSK4Q6SA08 328 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
LITAF-216ENST00000574848 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 FBXL13Q8NEE6 735 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 TTC8Q8TAM2 541 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 SLC2A14Q8TDB8 520 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 WHAMMQ8TF30 809 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 CPLX3Q8WVH0 158 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 PPP1R13BQ96KQ4 1090 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
LITAF-216ENST00000574848 TWNKQ96RR1 684 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 KCNK16Q96T55 309 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 HNRNPABQ99729 332 aaKnown RBP11.18□□□□□ -0.62
LITAF-216ENST00000574848 SMOQ99835 787 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 EDEM3Q9BZQ6 932 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 RNF38Q9H0F5 515 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
LITAF-216ENST00000574848 DUS2Q9NX74 493 aaKnown RBP11.18□□□□□ -0.62
LITAF-216ENST00000574848 CAPN11Q9UMQ6 739 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 COQ4Q9Y3A0 265 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 WNT6Q9Y6F9 365 aa11.18□□□□□ -0.62
LITAF-216ENST00000574848 CHURC1-FNTBB4DL54 471 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 HHLA1C9JL84 531 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 CLSTN1O94985 981 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 NFATC1O95644 943 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 FAM200BP0CF97 657 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 DRD1P21728 446 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 ZBED6P86452 979 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 GRSF1Q12849 480 aaKnown RBP eCLIP11.17□□□□□ -0.62
LITAF-216ENST00000574848 SYCP1Q15431 976 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 FBXO43Q4G163 708 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 MIIPQ5JXC2 388 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 E4F1Q66K89 784 aaPredicted RBP11.17□□□□□ -0.62
LITAF-216ENST00000574848 CLEC20AQ6ZU45 233 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 TMEM139Q8IV31 216 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 C12orf29Q8N999 325 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 KIF18AQ8NI77 898 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 RUBCNQ92622 972 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 SEMA4DQ92854 862 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 FBXO32Q969P5 355 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 EXOC4Q96A65 974 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 DNAJC7Q99615 494 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 MED10Q9BTT4 135 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 FAM49BQ9NUQ9 324 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 RAB20Q9NX57 234 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 ARMCX3Q9UH62 379 aaPredicted RBP11.17□□□□□ -0.62
LITAF-216ENST00000574848 CPQQ9Y646 472 aa11.17□□□□□ -0.62
LITAF-216ENST00000574848 GPR179Q6PRD1 2367 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 SLC9A3R1O14745 358 aaPredicted RBP11.16□□□□□ -0.62
LITAF-216ENST00000574848 COCHO43405 550 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 BEST1O76090 585 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 CYLC1P35663 651 aaPredicted RBP11.16□□□□□ -0.62
LITAF-216ENST00000574848 ORC1Q13415 861 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 GAB4Q2WGN9 574 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 CBWD6Q4V339 395 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 CBWD3Q5JTY5 395 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 CBWD5Q5RIA9 395 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 TRIM59Q8IWR1 403 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 TXLNBQ8N3L3 684 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 SCAMP5Q8TAC9 235 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 EZH1Q92800 747 aaPredicted RBP11.16□□□□□ -0.62
LITAF-216ENST00000574848 SLC35C1Q96A29 364 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 EEF2KMTQ96G04 330 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 P2RY13Q9BPV8 354 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 FBXO44Q9H4M3 255 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 TRMT1Q9NXH9 659 aaKnown RBP11.16□□□□□ -0.62
LITAF-216ENST00000574848 SMG5Q9UPR3 1016 aaKnown RBP11.16□□□□□ -0.62
LITAF-216ENST00000574848 PPP2R2CQ9Y2T4 447 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 MYH10P35580 1976 aa11.16□□□□□ -0.62
LITAF-216ENST00000574848 DMXL1Q9Y485 3027 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 EP300Q09472 2414 aaPredicted RBP11.15□□□□□ -0.62
LITAF-216ENST00000574848 CCDC163A0A0D9SF12 145 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 E2F8A0AVK6 867 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 PMM2O15305 246 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 EGFP01133 1207 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CYP17A1P05093 508 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 CNR2P34972 360 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 OPRD1P41143 372 aa11.15□□□□□ -0.62
LITAF-216ENST00000574848 EIF2DP41214 584 aaKnown RBP11.15□□□□□ -0.62
LITAF-216ENST00000574848 MAP3K7CLP57077 242 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms