RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 ETFBKMTQ8IXQ9 262 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 PHTF2Q8N3S3 785 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 TTC39CQ8N584 583 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 ALLCQ8N6M5 410 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 NAT16Q8N8M0 369 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 IL17RCQ8NAC3 791 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 ERCC4Q92889 916 aaPredicted RBP18.27■□□□□ 0.52
LITAF-211ENST00000572255 HEXIM2Q96MH2 286 aaKnown RBP18.27■□□□□ 0.52
LITAF-211ENST00000572255 ARID3AQ99856 593 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 DUSP16Q9BY84 665 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 DUSP15Q9H1R2 295 aaPredicted RBP18.27■□□□□ 0.52
LITAF-211ENST00000572255 CISHQ9NSE2 258 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 LAMA1P25391 3075 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 SLC16A3O15427 465 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 GREM1O60565 184 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 TULP3O75386 442 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 KLF8O95600 359 aaPredicted RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 ZNF806P0C7X5 589 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 RARGP13631 454 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 TIE1P35590 1138 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 PMS1P54277 932 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 ELF2Q15723 593 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 CRY1Q16526 586 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 ANO4Q32M45 955 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 HSF5Q4G112 596 aaPredicted RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 CBWD6Q4V339 395 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 DCAF17Q5H9S7 520 aaPredicted RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 CBWD3Q5JTY5 395 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 CBWD5Q5RIA9 395 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 EMC10Q5UCC4 262 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 TCERG1LQ5VWI1 586 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 ANKRD40Q6AI12 368 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 TMEM92Q6UXU6 159 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 RASSF3Q86WH2 238 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 ZC3H3Q8IXZ2 948 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 SLC4A11Q8NBS3 891 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 TXNDC5Q8NBS9 432 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 SPATA20Q8TB22 786 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 SMARCE1Q969G3 411 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 CNOT6LQ96LI5 555 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 TPSD1Q9BZJ3 242 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.26■□□□□ 0.51
LITAF-211ENST00000572255 DEC1Q9P2X7 70 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 NAGPAQ9UK23 515 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 LSM7Q9UK45 103 aaKnown RBP18.26■□□□□ 0.51
LITAF-211ENST00000572255 INVSQ9Y283 1065 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 PCDHGA5Q9Y5G8 931 aa18.26■□□□□ 0.51
LITAF-211ENST00000572255 SGK1O00141 431 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 MDM4O15151 490 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 HNRNPLP14866 589 aaKnown RBP eCLIP18.25■□□□□ 0.51
LITAF-211ENST00000572255 MPLP40238 635 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 KIR2DL1P43626 348 aaPredicted RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 RAD23BP54727 409 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 AASDHQ4L235 1098 aaPredicted RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 USP39Q53GS9 565 aaKnown RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 C10orf120Q5SQS8 335 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 KLHDC10Q6PID8 442 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 CCDC186Q7Z3E2 898 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 SCD5Q86SK9 330 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 C12orf50Q8NA57 414 aaPredicted RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 MDGA1Q8NFP4 955 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 TATDN2Q93075 761 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 TMEM176AQ96HP8 235 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 TIGD1Q96MW7 591 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 GTPBP4Q9BZE4 634 aaKnown RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 ZDHHC4Q9NPG8 344 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 HOOK1Q9UJC3 728 aaKnown RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 DNMT3LQ9UJW3 386 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 NUDT5Q9UKK9 219 aa18.25■□□□□ 0.51
LITAF-211ENST00000572255 MYO18AQ92614 2054 aaKnown RBP18.25■□□□□ 0.51
LITAF-211ENST00000572255 TRIM49BA6NDI0 452 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 TBC1D3BA6NDS4 549 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 RHOBTB1O94844 696 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 GBP1P32455 592 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 PSEN1P49768 467 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 LRRC63Q05C16 580 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 PREPLQ4J6C6 727 aaPredicted RBP18.24■□□□□ 0.51
LITAF-211ENST00000572255 EOGTQ5NDL2 527 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 PLA2G2CQ5R387 149 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 TTC30AQ86WT1 665 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 SMOC1Q9H4F8 434 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 FAM124BQ9H5Z6 455 aaPredicted RBP18.24■□□□□ 0.51
LITAF-211ENST00000572255 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
LITAF-211ENST00000572255 COQ4Q9Y3A0 265 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 USP3Q9Y6I4 520 aa18.24■□□□□ 0.51
LITAF-211ENST00000572255 ABCA7Q8IZY2 2146 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 THADAQ6YHU6 1953 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 ADAM23O75077 832 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 ALDH1A2O94788 518 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 ARHGAP17Q68EM7 881 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 GRAMD4Q6IC98 578 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 TADA2BQ86TJ2 420 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 C11orf74Q86VG3 221 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 ZNF276Q8N554 614 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 TERB1Q8NA31 727 aa18.23■□□□□ 0.51
LITAF-211ENST00000572255 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms