RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	PF4V1	P10720	104 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	HSPA6	P17066	643 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	EEFSEC	P57772	596 aa	Known RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	HDAC1	Q13547	482 aa	Predicted RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	UBE4A	Q14139	1066 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	ZRSR2	Q15696	482 aa	Known RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	IFIT1B	Q5T764	474 aa	Known RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	MTHFD1L	Q6UB35	978 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	PCGF5	Q86SE9	256 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	FANCB	Q8NB91	859 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	RP9	Q8TA86	221 aa	Known RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	AIFM3	Q96NN9	605 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	CAMKK2	Q96RR4	588 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	SLC29A3	Q9BZD2	475 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	MRPS18A	Q9NVS2	196 aa	Known RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	PIH1D1	Q9NWS0	290 aa	Known RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	ZNF70	Q9UC06	446 aa	Predicted RBP	4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	IP6K2	Q9UHH9	426 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	KNSTRN	Q9Y448	316 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	INSR	P06213	1382 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	THSD7A	Q9UPZ6	1657 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	ZNF804B	A4D1E1	1349 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	KIF7	Q2M1P5	1343 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	RGS12	O14924	1447 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	SMG6	Q86US8	1419 aa	Known RBP	4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	NSD3	Q9BZ95	1437 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	PARP4	Q9UKK3	1724 aa	Known RBP	4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	CCDC189	A1A4V9	331 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643		H0YIZ8	118 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	DNAJB5	O75953	348 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	DLD	P09622	509 aa	Known RBP	4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	NPS	P0C0P6	89 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	BDNF	P23560	247 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	MAN1A1	P33908	653 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	AMPH	P49418	695 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	ZNF134	P52741	427 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	TPTE	P56180	551 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	PIN1	Q13526	163 aa	Predicted RBP	4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	FGL2	Q14314	439 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	SLC44A4	Q53GD3	710 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	ARHGAP40	Q5TG30	622 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	ZNF280D	Q6N043	979 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	TOM1L2	Q6ZVM7	507 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	KRT27	Q7Z3Y8	459 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	DENND1C	Q8IV53	801 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	GRAMD1C	Q8IYS0	662 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	LRRC71	Q8N4P6	559 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	PCSK9	Q8NBP7	692 aa	Known RBP	4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	STAG1	Q8WVM7	1258 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	DPF1	Q92782	380 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	HOOK2	Q96ED9	719 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	CGRRF1	Q99675	332 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	PANK3	Q9H999	370 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	NRIP3	Q9NQ35	241 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	SERHL	Q9NQF3	203 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	DKK3	Q9UBP4	350 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	TMX2	Q9Y320	296 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	FLT4	P35916	1363 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	PARD3	Q8TEW0	1356 aa		4.22	□□□□□ -1.73
CDC27-213	ENST00000571643	MAP3K19	Q56UN5	1328 aa		4.21	□□□□□ -1.73
CDC27-213	ENST00000571643	MAP2	P11137	1827 aa	Known RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643		H3BML4	177 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	DCLK1	O15075	740 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	ALDH1L1	O75891	902 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	TJP3	O95049	919 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	IL6R	P08887	468 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	HOXC9	P31274	260 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	COPB2	P35606	906 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	PDE6C	P51160	858 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	ZNF81	P51508	661 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	LILRA4	P59901	499 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	RAB1A	P62820	205 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	POU5F1B	Q06416	359 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	BOP1	Q14137	746 aa	Known RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	TBC1D25	Q3MII6	688 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	MGAT5B	Q3V5L5	792 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	ODR4	Q5SWX8	454 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	C1QL2	Q7Z5L3	287 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	DAAM2	Q86T65	1068 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	VGLL2	Q8N8G2	317 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	DIS3L	Q8TF46	1054 aa	Known RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	ATG4A	Q8WYN0	398 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	TRMT13	Q9NUP7	481 aa	Known RBP	4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	SH3BP4	Q9P0V3	963 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	XPR1	Q9UBH6	696 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	SERGEF	Q9UGK8	458 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	SERTAD3	Q9UJW9	196 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	ANAPC4	Q9UJX5	808 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	RGPD5	Q99666	1765 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	BRWD3	Q6RI45	1802 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	OVOS2	A0A0G2JMS6	1433 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643	DISP2	A7MBM2	1401 aa		4.21	□□□□□ -1.74
CDC27-213	ENST00000571643		A0A088AWK7	358 aa		4.2	□□□□□ -1.74
CDC27-213	ENST00000571643	ZNF500	O60304	480 aa	Predicted RBP	4.2	□□□□□ -1.74
CDC27-213	ENST00000571643	CAND2	O75155	1236 aa		4.2	□□□□□ -1.74
CDC27-213	ENST00000571643	PRKCB	P05771	671 aa		4.2	□□□□□ -1.74

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