RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 NT5C3BQ969T7 300 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 PSMG2Q969U7 264 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 MRPL38Q96DV4 380 aaKnown RBP12.47□□□□□ -0.41
CDRT1-206ENST00000571263 WDR24Q96S15 920 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 ZDHHC7Q9NXF8 308 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 TRPM5Q9NZQ8 1165 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-206ENST00000571263 HYOU1Q9Y4L1 999 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 PCDHA3Q9Y5H8 950 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 XYLBO75191 536 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 C8AP07357 584 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 ZDHHC11BP0C7U3 371 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 SRGAP2BP0DMP2 458 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 PFKLP17858 780 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 CTNNA1P35221 906 aaKnown RBP12.46□□□□□ -0.41
CDRT1-206ENST00000571263 TUBP50607 506 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 RWDD2BP57060 319 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 TAF10Q12962 218 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 ODF2Q5BJF6 829 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-206ENST00000571263 LLGL2Q6P1M3 1020 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 DNAJB7Q7Z6W7 309 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-206ENST00000571263 PSTKQ8IV42 348 aaKnown RBP12.46□□□□□ -0.41
CDRT1-206ENST00000571263 TTC9BQ8N6N2 239 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 EMC1Q8N766 993 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 SLC7A14Q8TBB6 771 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 GIPC2Q8TF65 315 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 CLEC4CQ8WTT0 213 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 SLC22A17Q8WUG5 538 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 TBCBQ99426 244 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 NPY6RQ99463 290 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 TLR10Q9BXR5 811 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 CARD9Q9H257 536 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 TLE6Q9H808 572 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 ZMYM5Q9UJ78 669 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 SNX12Q9UMY4 172 aa12.46□□□□□ -0.41
CDRT1-206ENST00000571263 GBF1Q92538 1859 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 FAM170AA1A519 330 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 PRPSAP2O60256 369 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 GRAP2O75791 330 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 ZMYND10O75800 440 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 GJB6O95452 261 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 FTCDO95954 541 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 SLC2A3P11169 496 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 HMGA1P17096 107 aaKnown RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 PTPN2P17706 415 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 RDXP35241 583 aaKnown RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 IRS1P35568 1242 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 GPR15P49685 360 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 SULT1E1P49888 294 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 ZNF135P52742 658 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 OGDHQ02218 1023 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 IFRD2Q12894 506 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 NNTQ13423 1086 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 TAF5Q15542 800 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 DUSP6Q16828 381 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 ARL13BQ3SXY8 428 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 MSANTD2Q6P1R3 559 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 BHLHA9Q7RTU4 235 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 MAP7D3Q8IWC1 876 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 RCOR2Q8IZ40 523 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 FAM172AQ8WUF8 416 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 TEKT4Q8WW24 435 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 CASP10Q92851 521 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 CD101Q93033 1021 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 PIWIL1Q96J94 861 aaKnown RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 BTBD6Q96KE9 485 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 CFAP57Q96MR6 1250 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 SERPINB11Q96P15 392 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 DZANK1Q9NVP4 752 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 USP18Q9UMW8 372 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 MAGED2Q9UNF1 606 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-206ENST00000571263 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 PATJQ8NI35 1801 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 MYH10P35580 1976 aa12.45□□□□□ -0.42
CDRT1-206ENST00000571263 CLUHO75153 1309 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 A0A1W2PQH9 124 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 M0QYT0 321 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 NCK2O43639 380 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 LRCH4O75427 683 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 SOAT2O75908 522 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 URI1O94763 535 aaPredicted RBP12.44□□□□□ -0.42
CDRT1-206ENST00000571263 ZRANB2O95218 330 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDRT1-206ENST00000571263 PAPLNO95428 1278 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 ATP1A1P05023 1023 aaKnown RBP12.44□□□□□ -0.42
CDRT1-206ENST00000571263 FYNP06241 537 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 CDC25CP30307 473 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 ATP5C1P36542 298 aaKnown RBP12.44□□□□□ -0.42
CDRT1-206ENST00000571263 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 CDR1P51861 262 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 COPS2P61201 443 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 USP46P62068 366 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 HECTD3Q5T447 861 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 SDHAF4Q5VUM1 108 aa12.44□□□□□ -0.42
CDRT1-206ENST00000571263 BNIPLQ7Z465 357 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms