RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 FLAD1Q8NFF5 587 aa9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 OR6B3Q8NGW1 331 aa9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 NKD2Q969F2 451 aaPredicted RBP9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 CDHR1Q96JP9 859 aa9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 C20orf27Q9GZN8 174 aa9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 CXCL16Q9H2A7 254 aa9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
HDGFL3-206ENST00000568294 A0A087WZ62 844 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 WDR27A2RRH5 827 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SPDYE16A6NNV3 312 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SPATA31C2B4DYI2 1134 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PMM2O15305 246 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 CFLARO15519 480 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 C6orf222P0C671 652 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 GNAZP19086 355 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 GPD1P21695 349 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ARL2P36404 184 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 VHLP40337 213 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PSEN1P49768 467 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 MAP1SQ66K74 1059 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 RIPOR1Q6ZS17 1223 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PCGF5Q86SE9 256 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 FAM131BQ86XD5 332 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 KBTBD2Q8IY47 623 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 TNS4Q8IZW8 715 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PHC3Q8NDX5 983 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 FBXO41Q8TF61 875 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 NLRP7Q8WX94 980 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 OTUD5Q96G74 571 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 VCPIP1Q96JH7 1222 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ACO2Q99798 780 aaKnown RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 FDXACB1Q9BRP7 624 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 RNPEPQ9H4A4 650 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 DCLRE1BQ9H816 532 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PDLIM7Q9NR12 457 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PDGFCQ9NRA1 345 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 CPSF2Q9P2I0 782 aaKnown RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 DNAJC16Q9Y2G8 782 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 C10orf71Q711Q0 1435 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SPECC1L-ADORA2AF8WAN1 911 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 GPR25O00155 361 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 TRUB2O95900 331 aaKnown RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 HOXC6P09630 235 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 AP1B1Q10567 949 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 C6orf163Q5TEZ5 329 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 LPCAT4Q643R3 524 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 TRNP1Q6NT89 227 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 KDELC2Q7Z4H8 507 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 CMC1Q7Z7K0 106 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ADAM32Q8TC27 787 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 INPP5DQ92835 1189 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 AZIN2Q96A70 460 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 HPDLQ96IR7 371 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 IFT122Q9HBG6 1241 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 TXNDC16Q9P2K2 825 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SCOCQ9UIL1 159 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 STRIP2Q9ULQ0 834 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 C2CD2Q9Y426 696 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ANKRD31Q8N7Z5 1873 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 DOCK5Q9H7D0 1870 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ATAD5Q96QE3 1844 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 C3orf70A6NLC5 250 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SIGLEC16A6NMB1 481 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 E9PBE3 544 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 APOC4-APOC2K7ER74 178 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 APOL1O14791 398 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PPEF2O14830 753 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ITM2AO43736 263 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 KLHL41O60662 606 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 MSCO60682 206 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 FARP2O94887 1054 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 METTL18O95568 372 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 APOC2P02655 101 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ZNF286BP0CG31 522 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 STAG3L1P0CL83 205 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ATP6V1C1P21283 382 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SARNPP82979 210 aaKnown RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 PARP6Q2NL67 630 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 RASIP1Q5U651 963 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 CES4AQ5XG92 561 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC26A11Q86WA9 606 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 MAB21L3Q8N8X9 362 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 MTBPQ96DY7 904 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 MARK4Q96L34 752 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 GBP5Q96PP8 586 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 LGMNQ99538 433 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 KLC2Q9H0B6 622 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 CDT1Q9H211 546 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 AS3MTQ9HBK9 375 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 BATF3Q9NR55 127 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 ASNSD1Q9NWL6 643 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 UBP1Q9NZI7 540 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 KLK14Q9P0G3 267 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 DRG1Q9Y295 367 aaKnown RBP9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 UBR3Q6ZT12 1888 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 FOCADQ5VW36 1801 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
HDGFL3-206ENST00000568294 MED7O43513 233 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms