RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 SMTNL2Q2TAL5 461 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 ATP13A4Q4VNC1 1196 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 TXNRD3NBQ6F5E7 133 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 SCYL2Q6P3W7 929 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 NUP93Q8N1F7 819 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 ZNF461Q8TAF7 563 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 FAM172AQ8WUF8 416 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 ANKRD7Q92527 254 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 EDEM1Q92611 657 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 TCF25Q9BQ70 676 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 CARD9Q9H257 536 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 CYP4F11Q9HBI6 524 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 ENTPD7Q9NQZ7 604 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 COX16Q9P0S2 106 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 STK39Q9UEW8 545 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 AFF4Q9UHB7 1163 aaKnown RBP10.92□□□□□ -0.66
TCF4-236ENST00000567880 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 RWDD3Q9Y3V2 267 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 USP3Q9Y6I4 520 aa10.92□□□□□ -0.66
TCF4-236ENST00000567880 DOCK6Q96HP0 2047 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 SEC24AO95486 1093 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 CXCL14O95715 111 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 PYGMP11217 842 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 ATF2P15336 505 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 ATF6P18850 670 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 MIPP30301 263 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 SULT1E1P49888 294 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 ERVFC1P60507 584 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 USP46P62068 366 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 RPL10AP62906 217 aaKnown RBP10.91□□□□□ -0.66
TCF4-236ENST00000567880 PITX1P78337 314 aaPredicted RBP10.91□□□□□ -0.66
TCF4-236ENST00000567880 CKAP4Q07065 602 aaKnown RBP10.91□□□□□ -0.66
TCF4-236ENST00000567880 MTMR3Q13615 1198 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 SMC1AQ14683 1233 aaKnown RBP10.91□□□□□ -0.66
TCF4-236ENST00000567880 ACAP1Q15027 740 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 HADHQ16836 314 aaKnown RBP10.91□□□□□ -0.66
TCF4-236ENST00000567880 ODF2Q5BJF6 829 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 KCNT1Q5JUK3 1230 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 SEL1L2Q5TEA6 688 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 SYPL2Q5VXT5 272 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 PLPP4Q5VZY2 271 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 PM20D1Q6GTS8 502 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 DENND5BQ6ZUT9 1274 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 ARCQ7LC44 396 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 CCDC50Q8IVM0 306 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 CEP112Q8N8E3 955 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 POF1BQ8WVV4 589 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 TBCBQ99426 244 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.91□□□□□ -0.66
TCF4-236ENST00000567880 MAGED2Q9UNF1 606 aaPredicted RBP10.91□□□□□ -0.66
TCF4-236ENST00000567880 ATG2AQ2TAZ0 1938 aa10.91□□□□□ -0.66
TCF4-236ENST00000567880 TNRC18O15417 2968 aaPredicted RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 CTAGE15A4D2H0 777 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 ANKRD33BA6NCL7 494 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 PI4K2BG5E9Z4 385 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 PRRG1O14668 218 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 CTIFO43310 598 aaKnown RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 ABLIM3O94929 683 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 KRT1P04264 644 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 FYNP06241 537 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 GLI1P08151 1106 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 CNPP09543 421 aaKnown RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 SPATA31D3P0C874 917 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 CTAGE8P0CG41 777 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 DNAJB1P25685 340 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 IL1R2P27930 398 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 ELF1P32519 619 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 NOS2P35228 1153 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 PBX2P40425 430 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 PTPN9P43378 593 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 ATXN1P54253 815 aaKnown RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
TCF4-236ENST00000567880 CBX1P83916 185 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 SLC25A11Q02978 314 aaKnown RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 NME3Q13232 169 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 RAB33AQ14088 237 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 BSPRYQ5W0U4 402 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 TPGS2Q68CL5 300 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 ADAT2Q7Z6V5 191 aaKnown RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 CTAGE6Q86UF2 777 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 CTAGE4Q8IX94 777 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 SLC7A14Q8TBB6 771 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 IRGQQ8WZA9 623 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 SLC2A13Q96QE2 648 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
TCF4-236ENST00000567880 PLVAPQ9BX97 442 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 FBXO44Q9H4M3 255 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 CERS4Q9HA82 394 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 STAP1Q9ULZ2 295 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 USP18Q9UMW8 372 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 SSX2IPQ9Y2D8 614 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 ANAPC1Q9H1A4 1944 aa10.9□□□□□ -0.66
TCF4-236ENST00000567880 H0YGN5 161 aa10.9□□□□□ -0.67
TCF4-236ENST00000567880 M0QYT0 321 aa10.9□□□□□ -0.67
TCF4-236ENST00000567880 PGRMC1O00264 195 aaKnown RBP10.9□□□□□ -0.67
TCF4-236ENST00000567880 CES2O00748 559 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms