RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ZPBPQ9BS86 351 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CELF4Q9BZC1 486 aaKnown RBP11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CRLF2Q9HC73 371 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CD209Q9NNX6 404 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
UBFD1-205ENST00000566136 INTS10Q9NVR2 710 aaKnown RBP11.22□□□□□ -0.61
UBFD1-205ENST00000566136 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 NPFFR2Q9Y5X5 522 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 BAG3O95817 575 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 DLDP09622 509 aaKnown RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 HNMTP50135 292 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 GSTO1P78417 241 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 ATP2C1P98194 919 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 SP140Q13342 867 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 IL17AQ16552 155 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 BOLA3Q53S33 107 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 PLPPR4Q7Z2D5 763 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 KCNK18Q7Z418 384 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 MLKLQ8NB16 471 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 BAHD1Q8TBE0 780 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 TCHPQ9BT92 498 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 PACSIN1Q9BY11 444 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 BTBD1Q9H0C5 482 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 CLEC4MQ9H2X3 399 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 SCN9AQ15858 1988 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 CELF2O95319 508 aaKnown RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 SLFN14P0C7P3 912 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 ACADMP11310 421 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 CDC25AP30304 524 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 FATE1Q969F0 183 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 MAP7D2Q96T17 732 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 EMILIN2Q9BXX0 1053 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 SENP6Q9GZR1 1112 aaPredicted RBP11.21□□□□□ -0.61
UBFD1-205ENST00000566136 BLZF1Q9H2G9 400 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 PCDHB16Q9NRJ7 776 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 HSF4Q9ULV5 492 aa11.21□□□□□ -0.61
UBFD1-205ENST00000566136 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.62
UBFD1-205ENST00000566136 AP2B1P63010 937 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 HTRA4P83105 476 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 FOXO1Q12778 655 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 STK4Q13043 487 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 KBTBD12Q3ZCT8 623 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 CYP4F22Q6NT55 531 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 TSPYL5Q86VY4 417 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 BRI3BPQ8WY22 251 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 CCDC74BQ96LY2 380 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 CLCA2Q9UQC9 943 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 C22orf31O95567 290 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 BMP15O95972 392 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 PLATP00750 562 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 MYL4P12829 197 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 ZNF18P17022 549 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 SUMO3P55854 103 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 CDK17Q00537 523 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 PRPF4BQ13523 1007 aaKnown RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 GRM4Q14833 912 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 CRELD2Q6UXH1 353 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 USP51Q70EK9 711 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 BEND5Q7L4P6 421 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 HEATR3Q7Z4Q2 680 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 UNC45BQ8IWX7 931 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 BLIDQ8IZY5 108 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 GLIS1Q8NBF1 620 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 SPATA20Q8TB22 786 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 FAM120BQ96EK7 910 aaKnown RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 POP1Q99575 1024 aaKnown RBP11.2□□□□□ -0.62
UBFD1-205ENST00000566136 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 SLC25A18Q9H1K4 315 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 EPS8L2Q9H6S3 715 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 ZMAT4Q9H898 229 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 SNTG1Q9NSN8 517 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 ADGRE2Q9UHX3 823 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 MSRAQ9UJ68 235 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 FHOD1Q9Y613 1164 aa11.2□□□□□ -0.62
UBFD1-205ENST00000566136 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
UBFD1-205ENST00000566136 A0A1W2PQ09 198 aa11.19□□□□□ -0.62
UBFD1-205ENST00000566136 FCHO1O14526 889 aa11.19□□□□□ -0.62
UBFD1-205ENST00000566136 CYTH3O43739 400 aa11.19□□□□□ -0.62
UBFD1-205ENST00000566136 B3GALT4O96024 378 aa11.19□□□□□ -0.62
UBFD1-205ENST00000566136 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms