RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ARHGAP17Q68EM7 881 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 KLHDC10Q6PID8 442 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 PRR23CQ6ZRP0 262 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 TMEM25Q86YD3 366 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 ZNF276Q8N554 614 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 SLC35C1Q96A29 364 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 HEXIM2Q96MH2 286 aaKnown RBP16.51■□□□□ 0.23
CDH3-204ENST00000565453 NACA2Q9H009 215 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 SPHK2Q9NRA0 654 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 FRYLO94915 3013 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 DMXL1Q9Y485 3027 aa16.51■□□□□ 0.23
CDH3-204ENST00000565453 MED19A0JLT2 244 aaPredicted RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 MDM4O15151 490 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 ATP5C1P36542 298 aaKnown RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 GRIA2P42262 883 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 KDSRQ06136 332 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 PLK5Q496M5 336 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 RAB41Q5JT25 222 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 EMC10Q5UCC4 262 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 TMEM92Q6UXU6 159 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 CCDC33Q8N5R6 958 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 UBR7Q8N806 425 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 IL17RCQ8NAC3 791 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 TSTD1Q8NFU3 115 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 UBXN6Q9BZV1 441 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 DNAI2Q9GZS0 605 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 DUSP15Q9H1R2 295 aaPredicted RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 ARHGEF4Q9NR80 690 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 ARMCX3Q9UH62 379 aaPredicted RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 HOOK1Q9UJC3 728 aaKnown RBP16.5■□□□□ 0.23
CDH3-204ENST00000565453 NUDT5Q9UKK9 219 aa16.5■□□□□ 0.23
CDH3-204ENST00000565453 DCLK1O15075 740 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 TULP3O75386 442 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 BMP6P22004 513 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 TNFRSF4P43489 277 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 PSEN1P49768 467 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 DNAH14Q0VDD8 3507 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 CUL2Q13617 745 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 CRY1Q16526 586 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 HSF5Q4G112 596 aaPredicted RBP16.49■□□□□ 0.23
CDH3-204ENST00000565453 ISM2Q6H9L7 571 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 Q6ZNB5 142 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 TTC30AQ86WT1 665 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 ALLCQ8N6M5 410 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 NAT16Q8N8M0 369 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 NETO1Q8TDF5 533 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
CDH3-204ENST00000565453 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 CLIC5Q9NZA1 410 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 CDV3Q9UKY7 258 aaKnown RBP16.49■□□□□ 0.23
CDH3-204ENST00000565453 HCN2Q9UL51 889 aa16.49■□□□□ 0.23
CDH3-204ENST00000565453 SGK1O00141 431 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 PSMA7O14818 248 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 TRIM24O15164 1050 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 ADAM23O75077 832 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 GADD45BO75293 160 aaPredicted RBP16.48■□□□□ 0.23
CDH3-204ENST00000565453 KLF8O95600 359 aaPredicted RBP16.48■□□□□ 0.23
CDH3-204ENST00000565453 TIE1P35590 1138 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 PLA2G4AP47712 749 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 DGKEP52429 567 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 PLA2G2CQ5R387 149 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 BTBD8Q5XKL5 378 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 TTI2Q6NXR4 508 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 PIGZQ86VD9 579 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 ANKRD52Q8NB46 1076 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 TXNDC5Q8NBS9 432 aaKnown RBP16.48■□□□□ 0.23
CDH3-204ENST00000565453 CEP63Q96MT8 703 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 RTKNQ9BST9 563 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 MARK1Q9P0L2 795 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 DNMT3LQ9UJW3 386 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 NAGPAQ9UK23 515 aa16.48■□□□□ 0.23
CDH3-204ENST00000565453 SPAG17Q6Q759 2223 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.47■□□□□ 0.23
CDH3-204ENST00000565453 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 SLC30A4O14863 429 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 PMM2O15305 246 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 GDF9O60383 454 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 FOXD2O60548 495 aaPredicted RBP16.47■□□□□ 0.23
CDH3-204ENST00000565453 ZNF806P0C7X5 589 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 PPP1R2P41236 205 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 FMO5P49326 533 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 STIM1Q13586 685 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 ANO4Q32M45 955 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 C10orf120Q5SQS8 335 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 ANO7Q6IWH7 933 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 FOXR2Q6PJQ5 311 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 TERB1Q8NA31 727 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 MDGA1Q8NFP4 955 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 OLIG1Q8TAK6 271 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 P2RY11Q96G91 374 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 TPSD1Q9BZJ3 242 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 METTL14Q9HCE5 456 aaKnown RBP16.47■□□□□ 0.23
CDH3-204ENST00000565453 ZDHHC4Q9NPG8 344 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 DEC1Q9P2X7 70 aa16.47■□□□□ 0.23
CDH3-204ENST00000565453 LSM7Q9UK45 103 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms