RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 NTSR1P30989 418 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 MAGEA10P43363 369 aaPredicted RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 CXADRP78310 365 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 FPGSQ05932 587 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SF3A3Q12874 501 aaKnown RBP eCLIP2.92□□□□□ -1.94
CHD9-209ENST00000564255 TUBB3Q13509 450 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 DCTN1Q14203 1278 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 KCTD2Q14681 263 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 GEN1Q17RS7 908 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 FAM90A2PQ658T7 463 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 DGAT2L7PQ6IED9 249 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 ANO7Q6IWH7 933 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 ACAD10Q6JQN1 1059 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SYT13Q7L8C5 426 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 GDF7Q7Z4P5 450 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 DTX2Q86UW9 622 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 ZNF808Q8N4W9 903 aaPredicted RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 OVCA2Q8WZ82 227 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 ST8SIA4Q92187 359 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 GOLGA1Q92805 767 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 C7orf26Q96N11 449 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 TREX2Q9BQ50 279 aaPredicted RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 MECRQ9BV79 373 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 GPR63Q9BZJ6 419 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 PAIP1Q9H074 479 aaKnown RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 PRDM13Q9H4Q3 707 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 KCNK9Q9NPC2 374 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 TBX20Q9UMR3 447 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 DNAJC16Q9Y2G8 782 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 RNF114Q9Y508 228 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SETD1BQ9UPS6 1966 aaKnown RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 SLC38A8A6NNN8 435 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 KIAA0355O15063 1070 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 LMNAP02545 664 aaKnown RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 GATA3P23771 443 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 PBX1P40424 430 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 VAV2P52735 878 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 DCAF7P61962 342 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 BAK1Q16611 211 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 CD300EQ496F6 205 aaPredicted RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 TBC1D10BQ4KMP7 808 aaPredicted RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 ZNF648Q5T619 568 aaPredicted RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 L1TD1Q5T7N2 865 aaKnown RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 CCDC144NLQ6NUI1 221 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SGMS1Q86VZ5 419 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 IZUMO1Q8IYV9 350 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 OSCP1Q8WVF1 389 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SNX19Q92543 992 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 C17orf80Q9BSJ5 609 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 BRD8Q9H0E9 1235 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 NRDE2Q9H7Z3 1164 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 STEAP1Q9UHE8 339 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SERTAD3Q9UJW9 196 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 SLC45A1Q9Y2W3 748 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 RRP7AQ9Y3A4 280 aaKnown RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 LAS1LQ9Y4W2 734 aaKnown RBP2.92□□□□□ -1.94
CHD9-209ENST00000564255 PATE3B3GLJ2 98 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 HNRNPA1P09651 372 aaKnown RBP eCLIP2.91□□□□□ -1.94
CHD9-209ENST00000564255 CD19P15391 556 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CNR2P34972 360 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 SP2Q02086 613 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 HHEXQ03014 270 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 KCNJ12Q14500 433 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 RPS6KA2Q15349 733 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CTXN3Q4LDR2 81 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 ATG16L1Q676U5 607 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 OGFOD2Q6N063 350 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CLEC9AQ6UXN8 241 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 KRBA2Q6ZNG9 492 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 PIK3AP1Q6ZUJ8 805 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 C1QL4Q86Z23 238 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 METTL25Q8N6Q8 603 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 SYT8Q8NBV8 401 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CTHRC1Q96CG8 243 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 MCRS1Q96EZ8 462 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 NPAS1Q99742 590 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CHCHD6Q9BRQ6 235 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 PLEKHA5Q9HAU0 1116 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 LIN7CQ9NUP9 197 aaKnown RBP2.91□□□□□ -1.94
CHD9-209ENST00000564255 AASSQ9UDR5 926 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 KCND3Q9UK17 655 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 JAG2Q9Y219 1238 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 DRG1Q9Y295 367 aaKnown RBP2.91□□□□□ -1.94
CHD9-209ENST00000564255 GAGE12BA1L429 117 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 GAGE12HA6NDE8 117 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 K7ENM7 598 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 M0QZQ0 153 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 USO1O60763 962 aaKnown RBP2.91□□□□□ -1.94
CHD9-209ENST00000564255 KRT38O76015 456 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 RBM5P52756 815 aaKnown RBP eCLIP2.91□□□□□ -1.94
CHD9-209ENST00000564255 DGKQP52824 942 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CASP6P55212 293 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 PDE1CQ14123 709 aaPredicted RBP2.91□□□□□ -1.94
CHD9-209ENST00000564255 TMEM196Q5HYL7 178 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 DEPDC1Q5TB30 811 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 SPATA1Q5VX52 437 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 SLC9A4Q6AI14 798 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 ARMC6Q6NXE6 501 aa2.91□□□□□ -1.94
CHD9-209ENST00000564255 CIR1Q86X95 450 aaPredicted RBP2.91□□□□□ -1.94
CHD9-209ENST00000564255 CCDC89Q8N998 374 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms