RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 FRMD8Q9BZ67 464 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-209ENST00000564068 PLA2G4CQ9UP65 541 aa13.03□□□□□ -0.32
COMMD4-209ENST00000564068 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 FGFR3P22607 806 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 MLH1P40692 756 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 RTP1P59025 263 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 USP46P62068 366 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 INPP5AQ14642 412 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 SEL1L3Q68CR1 1132 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 ZBTB45Q96K62 511 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-209ENST00000564068 FSD1LQ9BXM9 530 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 CYLDQ9NQC7 956 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 ROBO1Q9Y6N7 1651 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 SAC3D1A6NKF1 404 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 PRPF4O43172 522 aaKnown RBP eCLIP13.02□□□□□ -0.322e-7■■■■■ 39.9
COMMD4-209ENST00000564068 LYPLA1O75608 230 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-209ENST00000564068 CSPG5O95196 566 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 SERPINE1P05121 402 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 ABCG1P45844 678 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 BOLA3Q53S33 107 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 LRRC8BQ6P9F7 803 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 SETD3Q86TU7 594 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-209ENST00000564068 CLEC4FQ8N1N0 589 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-209ENST00000564068 USP33Q8TEY7 942 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 NCLNQ969V3 563 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.32
COMMD4-209ENST00000564068 VPS33BQ9H267 617 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.32
COMMD4-209ENST00000564068 TCRBV9S1A1TA0A576 114 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 STMN1P16949 149 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 AVPR1AP37288 418 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 RAB27AP51159 221 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 WDR18Q9BV38 432 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 SIK2Q9H0K1 926 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 GID8Q9NWU2 228 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
COMMD4-209ENST00000564068 CYB561D2O14569 222 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 FAM155BO75949 473 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 GARTP22102 1010 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 NME5P56597 212 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 GRIK3Q13003 919 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 ADRM1Q16186 407 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 EML3Q32P44 896 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 NPNTQ6UXI9 565 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
COMMD4-209ENST00000564068 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-209ENST00000564068 DGCR14Q96DF8 476 aaKnown RBP13.02□□□□□ -0.33
COMMD4-209ENST00000564068 SDR42E2A6NKP2 422 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 VCLP18206 1134 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 SCNN1BP51168 640 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 CRADDP78560 199 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 SPDYAQ5MJ70 313 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 PTAR1Q7Z6K3 402 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 RXFP2Q8WXD0 754 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 ZFRQ96KR1 1074 aaKnown RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 EPAS1Q99814 870 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 ABT1Q9ULW3 272 aaKnown RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 LRRC42Q9Y546 428 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 PSMD10O75832 226 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 RMND5BQ96G75 393 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 VCPIP1Q96JH7 1222 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 DDX28Q9NUL7 540 aaKnown RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 FMN2Q9NZ56 1722 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 CYP3A7-CYP3A51PA0A087WV96 503 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 C15orf38-AP3S2A0A0A6YYH1 394 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 UQCRBP14927 111 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 TGM2P21980 687 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 CYP3A7P24462 503 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 RBL1P28749 1068 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 STAT5BP51692 787 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 NEK3P51956 506 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
COMMD4-209ENST00000564068 ARPINQ7Z6K5 226 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 TUBGCP5Q96RT8 1024 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 CSADQ9Y600 493 aa13.01□□□□□ -0.33
COMMD4-209ENST00000564068 C1orf232A0A0U1RR37 186 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 MAN1A2O60476 641 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 CHEK2O96017 543 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 MUTP22033 750 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 MIPP30301 263 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 EFHC2Q5JST6 749 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 HPS6Q86YV9 775 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 SLC9A9Q8IVB4 645 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 FAM49AQ9H0Q0 323 aaPredicted RBP13□□□□□ -0.33
COMMD4-209ENST00000564068 RNPEPQ9H4A4 650 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms