RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 ARL2BPQ9Y2Y0 163 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 FUOMA2VDF0 154 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 CAPN9O14815 690 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 DCTN3O75935 186 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 NPR3P17342 541 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 BMI1P35226 326 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 CAPZA2P47755 286 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 HNMTP50135 292 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 NFKB2Q00653 900 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 GFPT1Q06210 699 aaPredicted RBP6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 LSM12Q3MHD2 195 aaKnown RBP6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 PLA2G4EQ3MJ16 856 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 ATP13A4Q4VNC1 1196 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 SLFN13Q68D06 897 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 DSG4Q86SJ6 1040 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 PHC2Q8IXK0 858 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 MRPL50Q8N5N7 158 aaKnown RBP6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 ANKRD44Q8N8A2 993 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 PDCD6IPQ8WUM4 868 aaKnown RBP6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 C17orf80Q9BSJ5 609 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 PRKD2Q9BZL6 878 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 VPS45Q9NRW7 570 aa6.14□□□□□ -1.43
TUBGCP4-207ENST00000563963 APOC1P02654 83 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ACSL1P33121 698 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 MLLT3P42568 568 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 HARS2P49590 506 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 FUT2Q10981 343 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 COASYQ13057 564 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ART3Q13508 389 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 HNRNPDQ14103 355 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 NPTX1Q15818 432 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SPOPLQ6IQ16 392 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 USP43Q70EL4 1123 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 LRRC6Q86X45 466 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ATP6V0D2Q8N8Y2 350 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 RBBP8NLQ8NC74 664 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 C11orf65Q8NCR3 313 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 CLHC1Q8NHS4 586 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ADAMTS19Q8TE59 1207 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 GTF3C2Q8WUA4 911 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ATXN2LQ8WWM7 1075 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 DGCR14Q96DF8 476 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 STRBPQ96SI9 672 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 OLFM1Q99784 485 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PRDM11Q9NQV5 511 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 CYP26B1Q9NR63 512 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TRNAU1APQ9NX07 287 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 MTMR4Q9NYA4 1195 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 DACT1Q9NYF0 836 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 OR6C2Q9NZP2 312 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TRMT6Q9UJA5 497 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 GINS2Q9Y248 185 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ERGIC3Q9Y282 383 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 INVSQ9Y283 1065 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SSH2Q76I76 1423 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TMEM120BA0PK00 339 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 DDX39AO00148 427 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 BET1O15155 118 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PIAS2O75928 621 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SNRPA1P09661 255 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 KRT3P12035 628 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PPARAQ07869 468 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 STX5Q13190 355 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 NAB1Q13506 487 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SMAD1Q15797 465 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 FAM47CQ5HY64 1035 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PTRHD1Q6GMV3 140 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PM20D1Q6GTS8 502 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF530Q6P9A1 599 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TXNDC11Q6PKC3 985 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SNX31Q8N9S9 440 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SRFBP1Q8NEF9 429 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 VANGL1Q8TAA9 524 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 RAPGEF4Q8WZA2 1011 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 WASF1Q92558 559 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SYN2Q92777 582 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 CHFRQ96EP1 664 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PHACTR3Q96KR7 559 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZSCAN5AQ9BUG6 496 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SENP6Q9GZR1 1112 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TM9SF3Q9HD45 589 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 MYOM2P54296 1465 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 E2F8A0AVK6 867 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 LRRC14BA6NHZ5 514 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 SMIM23A6NLE4 172 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 OPHN1O60890 802 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TJP3O95049 919 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 NR3C2P08235 984 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 GSPT1P15170 499 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 RFC4P35249 363 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 HTR3AP46098 478 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 NKX2-5P52952 324 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 EFR3AQ14156 821 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 PPP1R26Q5T8A7 1209 aaPredicted RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 XRRA1Q6P2D8 792 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 TMPRSS9Q7Z410 1059 aa6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 R3HCC1LQ7Z5L2 792 aaKnown RBP6.13□□□□□ -1.43
TUBGCP4-207ENST00000563963 VSTM4Q8IW00 320 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms